RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 NANOGQ9H9S0 305 aa11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 MEPEQ9NQ76 525 aaPredicted RBP11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 CCDC167Q9P0B6 97 aa11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 CGGBP1Q9UFW8 167 aaPredicted RBP11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 V9GYY5 206 aaPredicted RBP11.42□□□□□ -0.58
UPF3AP2-202ENST00000578315 TRBV5-3A0A0A0MS03 114 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 TMEM120BA0PK00 339 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 TRAPPC13A5PLN9 417 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 FUT1P19526 365 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 LAP3P28838 519 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 DAP3P51398 398 aaKnown RBP11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 ARHGDIAP52565 204 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 DEFB112Q30KQ8 113 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 ZNF774Q6NX45 483 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 BLOC1S3Q6QNY0 202 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 BRD3OSQ6XYD6 125 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 Q6ZR03 302 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 PTOV1Q86YD1 416 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 MREGQ8N565 214 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 CLDN22Q8N7P3 220 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 PFN4Q8NHR9 129 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 SAMD8Q96LT4 415 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 PRSS27Q9BQR3 290 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 ELOVL3Q9HB03 270 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 INIPQ9NRY2 104 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 PPP1R3CQ9UQK1 317 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 MMP24Q9Y5R2 645 aa11.41□□□□□ -0.58
UPF3AP2-202ENST00000578315 CEACAM18A8MTB9 384 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 PLATP00750 562 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 WNT2P09544 360 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 TNFRSF1AP19438 455 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 TNFSF4P23510 183 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 MDH2P40926 338 aaKnown RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 ZNF133P52736 654 aaPredicted RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 RAG2P55895 527 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 PCBP3P57721 371 aaKnown RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 TOP3AQ13472 1001 aaPredicted RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 LAPTM4AQ15012 233 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 RUNDC3AQ59EK9 446 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 ARMC4Q5T2S8 1044 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 FAM27BQ5VT28 67 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 FIP1L1Q6UN15 594 aaKnown RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 EPGNQ6UW88 154 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 BTNL3Q6UXE8 466 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 C1QL4Q86Z23 238 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 ALDH16A1Q8IZ83 802 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 NMD3Q96D46 503 aaKnown RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 CPPED1Q9BRF8 314 aaPredicted RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 ZNF426Q9BUY5 554 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 SSBP3Q9BWW4 388 aaPredicted RBP11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 MARCH7Q9H992 704 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 BEX1Q9HBH7 125 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 ARMCX1Q9P291 453 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 CORO2BQ9UQ03 480 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 USH1CQ9Y6N9 552 aa11.4□□□□□ -0.58
UPF3AP2-202ENST00000578315 A0A1W2PPL8 197 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 CENPBD1B2RD01 187 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 TMEM178BH3BS89 294 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 H3BSA7 217 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 OR7A10O76100 309 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 ABHD16AO95870 558 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 CRYBA1P05813 215 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 THRBP10828 461 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 RPS2P15880 293 aaKnown RBP11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 CD247P20963 164 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 KRTAP10-3P60369 221 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 RELBQ01201 579 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 PAX2Q02962 417 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 SELPLGQ14242 412 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 OCLNQ16625 522 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 CYP51A1Q16850 503 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 SLC25A47Q6Q0C1 308 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 RHOUQ7L0Q8 258 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 HDDC2Q7Z4H3 204 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 ZER1Q7Z7L7 766 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 NKAIN4Q8IVV8 208 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 C1orf174Q8IYL3 243 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 POU5F2Q8N7G0 328 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 OR10S1Q8NGN2 331 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 OR4F5Q8NH21 305 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 ZNF420Q8TAQ5 688 aaPredicted RBP11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 TMEM255BQ8WV15 326 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 UPRTQ96BW1 309 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 CMBLQ96DG6 245 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 MMP27Q9H306 513 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 C20orf141Q9NUB4 165 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 C1RLQ9NZP8 487 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 LRCH1Q9Y2L9 728 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 TIMM10BQ9Y5J6 103 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 GMEB1Q9Y692 573 aa11.39□□□□□ -0.59
UPF3AP2-202ENST00000578315 IGHV2-70DA0A0C4DH43 119 aa11.38□□□□□ -0.59
UPF3AP2-202ENST00000578315 IGHV3-64DA0A0J9YX35 117 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms