RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PLA2G12AQ9BZM1 189 aa11.04□□□□□ -0.64
CCDC57-211ENST00000578187 SYT4Q9H2B2 425 aa11.04□□□□□ -0.64
CCDC57-211ENST00000578187 MYOZ1Q9NP98 299 aaPredicted RBP11.04□□□□□ -0.64
CCDC57-211ENST00000578187 ARFGEF3Q5TH69 2177 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 A0A1W2PPL8 197 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 NDUFS8O00217 210 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 EBAG9O00559 213 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 BHLHE40O14503 412 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 GNGT2O14610 69 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 IDH3BO43837 385 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 SERPINA5P05154 406 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 ZNF35P13682 527 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 USF1P22415 310 aaPredicted RBP11.03□□□□□ -0.64
CCDC57-211ENST00000578187 SERPINF1P36955 418 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CDKN2AP42771 156 aaKnown RBP11.03□□□□□ -0.64
CCDC57-211ENST00000578187 PDLIM4P50479 330 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 HGFACQ04756 655 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CCNIQ14094 377 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 RAB39AQ14964 217 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CYB5R2Q6BCY4 276 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 TMEM53Q6P2H8 277 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CD300LDQ6UXZ3 194 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 LRRC18Q8N456 261 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 C10orf105Q8TEF2 133 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 KCTD12Q96CX2 325 aaKnown RBP11.03□□□□□ -0.64
CCDC57-211ENST00000578187 FEVQ99581 238 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 NIPSNAP1Q9BPW8 284 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 C1orf198Q9H425 327 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 POLE4Q9NR33 117 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CA10Q9NS85 328 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 LPAR3Q9UBY5 353 aa11.03□□□□□ -0.64
CCDC57-211ENST00000578187 CR1P17927 2039 aa11.02□□□□□ -0.64
CCDC57-211ENST00000578187 B9A039 149 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 DEAF1O75398 565 aaPredicted RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 E2F6O75461 281 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 KHDRBS3O75525 346 aaKnown RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 CST2P09228 141 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 HIST1H1CP16403 213 aaKnown RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 ZNF32P17041 273 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 MSR1P21757 451 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 LAP3P28838 519 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 COX10Q12887 443 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 ENDOGQ14249 297 aaKnown RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 SGCAQ16586 387 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 CLEC12AQ5QGZ9 265 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 LEG1Q6P5S2 330 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 JAZF1Q86VZ6 243 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 ZNF540Q8NDQ6 660 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 NMNAT3Q96T66 252 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 VRK1Q99986 396 aaPredicted RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 BEX2Q9BXY8 128 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 NUAK2Q9H093 628 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 KCNN2Q9H2S1 579 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 ZNF442Q9H7R0 627 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 NTN4Q9HB63 628 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 TBC1D23Q9NUY8 699 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 ARMC1Q9NVT9 282 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 PDP1Q9P0J1 537 aaPredicted RBP11.02□□□□□ -0.65
CCDC57-211ENST00000578187 BAIAP2Q9UQB8 552 aa11.02□□□□□ -0.65
CCDC57-211ENST00000578187 IGLV1-36A0A0B4J1U3 117 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 RNF212BA8MTL3 300 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 GPRIN2O60269 458 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SLC16A7O60669 478 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 TIPRLO75663 272 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 CIB2O75838 187 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SOX14O95416 240 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SNAP29O95721 258 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 RENP00797 406 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SCG5P05408 212 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 FAM157CP0CG43 387 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 NR4A1P22736 598 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 CRABP1P29762 137 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 GUCA1AP43080 201 aaPredicted RBP11.01□□□□□ -0.65
CCDC57-211ENST00000578187 GZMKP49863 264 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
CCDC57-211ENST00000578187 CARTPTQ16568 116 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SWI5Q1ZZU3 235 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 PABPC1L2AQ5JQF8 200 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SHQ1Q6PI26 577 aaKnown RBP11.01□□□□□ -0.65
CCDC57-211ENST00000578187 DNM1P34Q6PK57 102 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 VHLLQ6RSH7 139 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SYT9Q86SS6 491 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 GLB1L2Q8IW92 636 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 HS3ST5Q8IZT8 346 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 LNX2Q8N448 690 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 NPEPL1Q8NDH3 523 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SLC30A7Q8NEW0 376 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SDR9C7Q8NEX9 313 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 OR4Q3Q8NH05 313 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 OR4K13Q8NH42 304 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 TMEM158Q8WZ71 300 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 NRBF2Q96F24 287 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 WACQ9BTA9 647 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 ZNF416Q9BWM5 594 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 RACGAP1Q9H0H5 632 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
CCDC57-211ENST00000578187 RNF121Q9H920 327 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms