RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 HLA-AP01891 365 aaKnown RBP12.33□□□□□ -0.44
NDEL1-204ENST00000578172 HCKP08631 526 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 CXCL2P19875 107 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 GPR3P46089 330 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 BAMBIQ13145 260 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 STEAP1BQ6NZ63 245 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 MOKQ9UQ07 419 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 PCDH15Q96QU1 1955 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 LOC101059948A0A1B0GTJ6 334 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 VSIG10L2P0DP72 767 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 PGAM2P15259 253 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 ACSM1Q08AH1 577 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 SGCAQ16586 387 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 PXKQ7Z7A4 578 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 SYS1Q8N2H4 156 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 RBP7Q96R05 134 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 GABRG3Q99928 467 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 PLEKHA1Q9HB21 404 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 WBP1LQ9NX94 342 aa12.33□□□□□ -0.44
NDEL1-204ENST00000578172 MRTO4Q9UKD2 239 aaKnown RBP12.33□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF205O95201 554 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 RLN2P04090 185 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 TPOP07202 933 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 PNMTP11086 282 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 CD38P28907 300 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 AVPR2P30518 371 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 FOXK1P85037 733 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 CEBPEQ15744 281 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF584Q8IVC4 421 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 TEX19Q8NA77 164 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 TRAF4Q9BUZ4 470 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 DUSP15Q9H1R2 295 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 CLEC1BQ9P126 229 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 SUSD2Q9UGT4 822 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF106Q9H2Y7 1883 aaKnown RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 MEIKINA0A087WXM9 373 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 TRAV1-2A0A0B4J238 106 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 C5orf67F2Z3F1 127 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 HSD11B1P28845 292 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 GLT8D1Q68CQ7 371 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 OR10K1Q8NGX5 313 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 LINC00052Q96N35 136 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 ABHD6Q9BV23 337 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 OBP2AQ9NY56 170 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 A6NCN8 305 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 F8W036 122 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 PGCP20142 388 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 YPEL5P62699 121 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 BLOC1S1P78537 153 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 EGR4Q05215 589 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 SLC9A3R2Q15599 337 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 TSSK4Q6SA08 328 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 INO80EQ8NBZ0 244 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 ANGPTL6Q8NI99 470 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 WNT2BQ93097 391 aa12.32□□□□□ -0.44
NDEL1-204ENST00000578172 MRPL38Q96DV4 380 aaKnown RBP12.32□□□□□ -0.44
NDEL1-204ENST00000578172 MASP2O00187 686 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 TXNL1O43396 289 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 PMP2P02689 132 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 FOLR1P15328 257 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 DPP4P27487 766 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 RBM34P42696 430 aaKnown RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 LINC01590Q5TEZ4 76 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 TMEM225Q6GV28 225 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 KCTD18Q6PI47 426 aaPredicted RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF546Q86UE3 836 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 GKN2Q86XP6 184 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 STEAP2Q8NFT2 490 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 HAVCR2Q8TDQ0 301 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 METTL7AQ9H8H3 244 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 FANCFQ9NPI8 374 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF736B4DX44 427 aaPredicted RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 F5H5K5 113 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 SGCEO43556 437 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 LUMP51884 338 aaPredicted RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 MOGAT2Q3SYC2 334 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 GALNT16Q8N428 558 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ZSCAN1Q8NBB4 408 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 OR1J2Q8NGS2 313 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 CTHRC1Q96CG8 243 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 HAVCR1Q96D42 359 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 LMF2Q9BU23 707 aaKnown RBP12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ZNF304Q9HCX3 659 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 FGF21Q9NSA1 209 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 GGT3PA6NGU5 568 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 M0R036 132 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 TNFRSF10CO14798 259 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 TNFSF14O43557 240 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 ACSM4P0C7M7 580 aa12.31□□□□□ -0.44
NDEL1-204ENST00000578172 HTR2CP28335 458 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms