RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 B3GNT2Q9NY97 397 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 NPAP1Q9NZP6 1156 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 AASSQ9UDR5 926 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 F8P00451 2351 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 CACNA1CQ13936 2221 aa7.47□□□□□ -1.21
NUP88-211ENST00000575976 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 CCDC182A6NF36 153 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 DPRXA6NFQ7 191 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 H0YJX3 145 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 M0R1B8 84 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 SIAH2O43255 324 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 PRODHO43272 600 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 UBL3O95164 117 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 MMP7P09237 267 aaPredicted RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 CBR1P16152 277 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ZNF32P17041 273 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 GABRB1P18505 474 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 FMO3P31513 532 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 AQP4P55087 323 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 RPS7P62081 194 aaKnown RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 LSM6P62312 80 aaKnown RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 GSG1Q2KHT4 349 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 SLC36A2Q495M3 483 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 SLC35D3Q5M8T2 416 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 C1QTNF12Q5T7M4 302 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ZNF691Q5VV52 312 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 NXNL2Q5VZ03 156 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 TTC23Q5W5X9 447 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 SSX8Q7RTT4 187 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ENTHD1Q8IYW4 607 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 DEPDC4Q8N2C3 294 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 OR10H5Q8NGA6 315 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ZMYND19Q96E35 227 aaPredicted RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 ZNF75AQ96N20 296 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 TEAD3Q99594 435 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ADI1Q9BV57 179 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 ZNF416Q9BWM5 594 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 KCNN2Q9H2S1 579 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 VCX3BQ9H321 246 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 WDR76Q9H967 626 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 CCNB1IP1Q9NPC3 277 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 RASSF1Q9NS23 344 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 H2AFY2Q9P0M6 372 aaPredicted RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 CRNNQ9UBG3 495 aaPredicted RBP7.46□□□□□ -1.22
NUP88-211ENST00000575976 KCNN3Q9UGI6 736 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 MOKQ9UQ07 419 aa7.46□□□□□ -1.22
NUP88-211ENST00000575976 MTORP42345 2549 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 IGHV1-18A0A0C4DH31 117 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 C12orf71A8MTZ7 269 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 DEFB108AA8MXU0 73 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 H0YAE9 185 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ZNF593O00488 134 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 SELENOFO60613 162 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 RAB36O95755 333 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 IGKV3-15P01624 115 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 IGLV1-44P01699 117 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 HRGP04196 525 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 CELA3BP08861 270 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 PSKH1P11801 424 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ZNF823P16415 610 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 PAX7P23759 505 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 LOXP28300 417 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 GSTT1P30711 240 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ARR3P36575 388 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 CAPGP40121 348 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 VHLP40337 213 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 RPS27P42677 84 aaKnown RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 IDH3GP51553 393 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 BLVRAP53004 296 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 SNRPGP62308 76 aaKnown RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 ADAM8P78325 824 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 PSG4Q00888 419 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 IL5RAQ01344 420 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 RAB39AQ14964 217 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 DAZAP2Q15038 168 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 PABPC1L2AQ5JQF8 200 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 NCMAPQ5T1S8 102 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 C6orf52Q5T4I8 152 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 TMEM53Q6P2H8 277 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 CORO6Q6QEF8 472 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 IZUMO2Q6UXV1 221 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 MEPCEQ7L2J0 689 aaKnown RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 DPPA2Q7Z7J5 298 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 SYT9Q86SS6 491 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 MYPOPQ86VE0 399 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 ZNF584Q8IVC4 421 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 LINC00346Q8IVM7 164 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 TIGD4Q8IY51 512 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ZNF295-AS1Q8N0V1 137 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 FAM169BQ8N8A8 192 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 AKR7LQ8NHP1 331 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 RHOXF1Q8NHV9 184 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 TFAP2CQ92754 450 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 PIK3IP1Q96FE7 263 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 PLPPR2Q96GM1 343 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 MS4A3Q96HJ5 214 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 ZNF582Q96NG8 517 aaPredicted RBP7.45□□□□□ -1.22
NUP88-211ENST00000575976 APOL4Q9BPW4 351 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 WACQ9BTA9 647 aa7.45□□□□□ -1.22
NUP88-211ENST00000575976 OR2H1Q9GZK4 316 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms