RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 TMCO5AQ8N6Q1 288 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 LSMEM1Q8N8F7 131 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 OR6K3Q8NGY3 331 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 BBS10Q8TAM1 723 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 FAM222BQ8WU58 562 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 CPNE4Q96A23 557 aaPredicted RBP4.16□□□□□ -1.74
PRPF8-211ENST00000574728 LRRC58Q96CX6 371 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 DTNBP1Q96EV8 351 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 WFIKKN1Q96NZ8 548 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 OR5B2Q96R09 309 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF300Q96RE9 604 aaPredicted RBP4.16□□□□□ -1.74
PRPF8-211ENST00000574728 ARHGDIGQ99819 225 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 ZNF426Q9BUY5 554 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 RBM24Q9BX46 236 aaKnown RBP4.16□□□□□ -1.74
PRPF8-211ENST00000574728 LIME1Q9H400 295 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 CYSLTR2Q9NS75 346 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 CMTM6Q9NX76 183 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 PAQR5Q9NXK6 330 aaPredicted RBP4.16□□□□□ -1.74
PRPF8-211ENST00000574728 CALML5Q9NZT1 146 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 B3GAT1Q9P2W7 334 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 SEC14L4Q9UDX3 406 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 LEF1Q9UJU2 399 aaPredicted RBP4.16□□□□□ -1.74
PRPF8-211ENST00000574728 TRAPPC4Q9Y296 219 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 NDUFAF1Q9Y375 327 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 TMED7Q9Y3B3 224 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 PAM16Q9Y3D7 125 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 HDGFL3Q9Y3E1 203 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 CSPG4Q6UVK1 2322 aa4.16□□□□□ -1.74
PRPF8-211ENST00000574728 A0A0B4J2E0 115 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 LOC100653049A0A140TA62 436 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 A0A1B0GX12 115 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 CCT8L1PA6NM43 557 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 INAFM1C9JVW0 142 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ANGPT2O15123 496 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 SNX3O60493 162 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 KRT34O76011 436 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ANP32DO95626 131 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 NUDT14O95848 222 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 HPRP00739 348 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 YES1P07947 543 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 VIMP08670 466 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TROVE2P10155 538 aaKnown RBP eCLIP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 IL7RP16871 459 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 PSMB1P20618 241 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 COX5AP20674 150 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 CRYGSP22914 178 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 PPIBP23284 216 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ME2P23368 584 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 AQP1P29972 269 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 CDAP32320 146 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 OR3A2P47893 321 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 POLR2HP52434 150 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 RPS3AP61247 264 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 HPCAP84074 193 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 RBBP4Q09028 425 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 SCARB2Q14108 478 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 HNF4GQ14541 408 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 SLC17A1Q14916 467 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TSC22D1Q15714 1073 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ZSWIM7Q19AV6 140 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 IQCCQ4KMZ1 466 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 EEF1A1P5Q5VTE0 462 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 WBP2NLQ6ICG8 309 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ZNF550Q7Z398 422 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 CDC20BQ86Y33 519 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 EPHX4Q8IUS5 362 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ZNF440Q8IYI8 595 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 CNEP1R1Q8N9A8 125 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 SMYD1Q8NB12 490 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ATP6V1C2Q8NEY4 427 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 OR8J3Q8NGG0 315 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 OR6T1Q8NGN1 323 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 OR10A6Q8NH74 314 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TMEM234Q8WY98 164 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TAAR8Q969N4 342 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 RCN3Q96D15 328 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 DNAJA3Q96EY1 480 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 SLC41A3Q96GZ6 507 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ZNF570Q96NI8 536 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 DACH2Q96NX9 599 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 PRSS27Q9BQR3 290 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TMEM204Q9BSN7 226 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 POTEKPQ9BYX7 375 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 RAD21L1Q9H4I0 556 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 C12orf10Q9HB07 376 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 GLRX2Q9NS18 164 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 KRT84Q9NSB2 600 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 OR6C3Q9NZP0 311 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 TMEM181Q9P2C4 612 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 MCTS1Q9ULC4 181 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 PROCRQ9UNN8 238 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 IFT52Q9Y366 437 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 LSM4Q9Y4Z0 139 aaKnown RBP4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ABCA2Q9BZC7 2435 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 ATRQ13535 2644 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 JMJD1CQ15652 2540 aa4.15□□□□□ -1.75
PRPF8-211ENST00000574728 A0A087WUJ7 227 aa4.14□□□□□ -1.75
PRPF8-211ENST00000574728 TUBAL3A6NHL2 446 aa4.14□□□□□ -1.75
PRPF8-211ENST00000574728 GJE1A6NN92 205 aa4.14□□□□□ -1.75
PRPF8-211ENST00000574728 BBIP1A8MTZ0 92 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms