RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 H0YIZ8 118 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 WRBO00258 174 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 AK1P00568 194 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 PRNPP04156 253 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SERPINA5P05154 406 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SNRNP70P08621 437 aaKnown RBP13.01□□□□□ -0.33
SMG6-215ENST00000574501 HLA-GP17693 338 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 ACTR1AP61163 376 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 DMWDQ09019 674 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 GLYATL3Q5SZD4 288 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 FHL5Q5TD97 284 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 ASPHD2Q6ICH7 369 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 CDRT4Q8N9R6 151 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 MFSD9Q8NBP5 474 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 OR4N2Q8NGD1 307 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 DUSP22Q9NRW4 184 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 A0A1W2PPH5 198 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 TMEM212A6NML5 194 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 CT62P0C5K7 136 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 EIF2S3P41091 472 aaKnown RBP13.01□□□□□ -0.33
SMG6-215ENST00000574501 PMPCAQ10713 525 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 WDR38Q5JTN6 314 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 VN1R4Q7Z5H5 301 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 ZNF584Q8IVC4 421 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SUSD6Q92537 303 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 FOXN4Q96NZ1 517 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 AMELYQ99218 206 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 C20orf24Q9BUV8 137 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 TRIM2Q9C040 744 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 LMAN2LQ9H0V9 348 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SYT4Q9H2B2 425 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 SLC22A13Q9Y226 551 aa13.01□□□□□ -0.33
SMG6-215ENST00000574501 A0A1W2PQ45 241 aaPredicted RBP13□□□□□ -0.33
SMG6-215ENST00000574501 A0A1W2PQY0 241 aa13□□□□□ -0.33
SMG6-215ENST00000574501 P2RX6O15547 441 aa13□□□□□ -0.33
SMG6-215ENST00000574501 LRP3O75074 770 aa13□□□□□ -0.33
SMG6-215ENST00000574501 MED6O75586 246 aa13□□□□□ -0.33
SMG6-215ENST00000574501 IGHV2-5P01817 119 aa13□□□□□ -0.33
SMG6-215ENST00000574501 F13BP05160 661 aa13□□□□□ -0.33
SMG6-215ENST00000574501 RNF224P0DH78 156 aa13□□□□□ -0.33
SMG6-215ENST00000574501 GPX4P36969 197 aaPredicted RBP13□□□□□ -0.33
SMG6-215ENST00000574501 NAAAQ02083 359 aa13□□□□□ -0.33
SMG6-215ENST00000574501 ULK3Q6PHR2 472 aa13□□□□□ -0.33
SMG6-215ENST00000574501 LINC00114Q6XXX2 140 aa13□□□□□ -0.33
SMG6-215ENST00000574501 ERN2Q76MJ5 926 aaKnown RBP13□□□□□ -0.33
SMG6-215ENST00000574501 DEFB128Q7Z7B8 93 aa13□□□□□ -0.33
SMG6-215ENST00000574501 CDC20BQ86Y33 519 aa13□□□□□ -0.33
SMG6-215ENST00000574501 SLC43A2Q8N370 569 aa13□□□□□ -0.33
SMG6-215ENST00000574501 SECTM1Q8WVN6 248 aa13□□□□□ -0.33
SMG6-215ENST00000574501 TCTEX1D2Q8WW35 142 aa13□□□□□ -0.33
SMG6-215ENST00000574501 IP6K3Q96PC2 410 aa13□□□□□ -0.33
SMG6-215ENST00000574501 MAP3K3Q99759 626 aa13□□□□□ -0.33
SMG6-215ENST00000574501 CACFD1Q9UGQ2 172 aa13□□□□□ -0.33
SMG6-215ENST00000574501 MRPS18BQ9Y676 258 aaKnown RBP13□□□□□ -0.33
SMG6-215ENST00000574501 DOCK9Q9BZ29 2069 aa13□□□□□ -0.33
SMG6-215ENST00000574501 DCDC2BA2VCK2 349 aa13□□□□□ -0.33
SMG6-215ENST00000574501 ARPC3O15145 178 aa13□□□□□ -0.33
SMG6-215ENST00000574501 MBTPS2O43462 519 aa13□□□□□ -0.33
SMG6-215ENST00000574501 DOK2O60496 412 aa13□□□□□ -0.33
SMG6-215ENST00000574501 MT-ND4LP03901 98 aa13□□□□□ -0.33
SMG6-215ENST00000574501 ACKR3P25106 362 aa13□□□□□ -0.33
SMG6-215ENST00000574501 TSFMP43897 325 aaKnown RBP13□□□□□ -0.33
SMG6-215ENST00000574501 LSSP48449 732 aa13□□□□□ -0.33
SMG6-215ENST00000574501 PGDP52209 483 aa13□□□□□ -0.33
SMG6-215ENST00000574501 RNASE10Q5GAN6 216 aaKnown RBP13□□□□□ -0.33
SMG6-215ENST00000574501 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
SMG6-215ENST00000574501 DRAM2Q6UX65 266 aa13□□□□□ -0.33
SMG6-215ENST00000574501 C10orf53Q8N6V4 93 aa13□□□□□ -0.33
SMG6-215ENST00000574501 ACBD4Q8NC06 268 aa13□□□□□ -0.33
SMG6-215ENST00000574501 RBM18Q96H35 190 aaKnown RBP13□□□□□ -0.33
SMG6-215ENST00000574501 CMKLR1Q99788 373 aa13□□□□□ -0.33
SMG6-215ENST00000574501 GGACTQ9BVM4 153 aa13□□□□□ -0.33
SMG6-215ENST00000574501 PRR13Q9NZ81 148 aa13□□□□□ -0.33
SMG6-215ENST00000574501 FBXL21Q9UKT6 434 aa13□□□□□ -0.33
SMG6-215ENST00000574501 IGLON5A6NGN9 336 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 ZNF729A6NN14 1252 aaPredicted RBP12.99□□□□□ -0.33
SMG6-215ENST00000574501 STK17BO94768 372 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 ZNF432O94892 652 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 IL2RAP01589 272 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 C8AP07357 584 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 HTR2CP28335 458 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 MAP3K8P41279 467 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 GAL3ST3Q96A11 431 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 TMEM41AQ96HV5 264 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 OR5AC2Q9NZP5 309 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 ARID1AO14497 2285 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 FGF17O60258 216 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 CD5P06127 495 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 SELLP14151 372 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 MAOAP21397 527 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 CENPAP49450 140 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 PNLIPRP3Q17RR3 467 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 TMEM244Q5VVB8 128 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 FAM166AQ6J272 317 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 SLC35D2Q76EJ3 337 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 TMEM52Q8NDY8 209 aa12.99□□□□□ -0.33
SMG6-215ENST00000574501 ADAMTS17Q8TE56 1095 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms