RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 ZNF716A6NP11 495 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 ACOT7O00154 380 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 NCR1O76036 304 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 TNFSF10P50591 281 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 HSD17B12Q53GQ0 312 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 IGFL2Q6UWQ7 119 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 PRSS35Q8N3Z0 413 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 MEIOBQ8N635 442 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 ZNF676Q8N7Q3 588 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 FDCSPQ8NFU4 85 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 RNF133Q8WVZ7 376 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 RGP1Q92546 391 aaPredicted RBP25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 C1orf198Q9H425 327 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 ACKR4Q9NPB9 350 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 FLVCR1Q9Y5Y0 555 aa25.83■■□□□ 1.73
CTDNEP1-208ENST00000573600 LOC110117498-PIK3R3F6TDL0 507 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 GUCA1AP43080 201 aaPredicted RBP25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 BCL2A1Q16548 175 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 Q499Y3 187 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 OR7E24Q6IFN5 339 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 SPATC1Q76KD6 591 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 PNPLA5Q7Z6Z6 429 aaPredicted RBP25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 FAM109AQ8N4B1 249 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 THRSPQ92748 146 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 SLC6A15Q9H2J7 730 aa25.83■■□□□ 1.72
CTDNEP1-208ENST00000573600 CYTIPO60759 359 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 ZNF708P17019 499 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 RAB3BP20337 219 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 CLDN18P56856 261 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 SLC10A1Q14973 349 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 WDR38Q5JTN6 314 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 FCRLAQ7L513 359 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 LAX1Q8IWV1 398 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 OR2AJ1Q8NGZ0 328 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 ROBO4Q8WZ75 1007 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 KCTD12Q96CX2 325 aaKnown RBP25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 ABCB9Q9NP78 766 aa25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 PAQR5Q9NXK6 330 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 FOXD3Q9UJU5 478 aaPredicted RBP25.82■■□□□ 1.72
CTDNEP1-208ENST00000573600 TRBV5-5A0A0J9YX44 114 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 PPP3R1P63098 170 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 HIST2H2ABQ8IUE6 130 aaPredicted RBP25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 C20orf196Q8IYI0 205 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 POLE4Q9NR33 117 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 POLR1DQ9Y2S0 133 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 R4GMQ9 66 aa25.81■■□□□ 1.72
CTDNEP1-208ENST00000573600 A0A1B0GTH9 108 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 H2BFMP0C1H6 154 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 KIR3DL2P43630 455 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 SELENOPP49908 381 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 DEFB109BQ30KR1 87 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 RHOUQ7L0Q8 258 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 ABTB1Q969K4 478 aaPredicted RBP25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 DERL3Q96Q80 235 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 NOX4Q9NPH5 578 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 UGT2A1Q9Y4X1 527 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 A0A1W2PPK0 400 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 GPR171O14626 319 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 SLC43A1O75387 559 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 WNT11O96014 354 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 ACTL6AO96019 429 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 ZNF12P17014 697 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 CDAP32320 146 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 DCTDP32321 178 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 SFXN4Q6P4A7 337 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 CORO6Q6QEF8 472 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 FOXL2NBQ6ZUU3 175 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 NR2C2APQ86WQ0 139 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 CATSPERDQ86XM0 798 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 GPR148Q8TDV2 347 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 SLAMF6Q96DU3 332 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 MIXL1Q9H2W2 232 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 EMC7Q9NPA0 242 aa25.8■■□□□ 1.72
CTDNEP1-208ENST00000573600 SRSF10O75494 262 aaKnown RBP25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 OCM2P0CE71 109 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 SRMP19623 302 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 LSM6P62312 80 aaKnown RBP25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 NHLH1Q02575 133 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 ZNF845Q96IR2 970 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 CENPMQ9NSP4 180 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 COMMD3Q9UBI1 195 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 GDF2Q9UK05 429 aaPredicted RBP25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 LHFPL6Q9Y693 200 aa25.79■■□□□ 1.72
CTDNEP1-208ENST00000573600 FAM186AA6NE01 2351 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 PDCD5O14737 125 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 DHHO43323 396 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 PNPP00491 289 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 RAF1P04049 648 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 ZNF84P51523 738 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 PHYHD1Q5SRE7 291 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 IDNKQ5T6J7 187 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 ULBP2Q9BZM5 246 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 ADAM30Q9UKF2 790 aa25.78■■□□□ 1.72
CTDNEP1-208ENST00000573600 A0A0G2JK05 382 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 ACOD1A6NK06 481 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 PIN1P1O15428 100 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 CEACAM4O75871 244 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 ZNF181Q2M3W8 571 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 AAED1Q7RTV5 226 aa25.77■■□□□ 1.72
CTDNEP1-208ENST00000573600 NELFAQ9H3P2 528 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms