RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 SNTB2Q13425 540 aaKnown RBP7.46□□□□□ -1.22
SMG6-210ENST00000572205 TNK1Q13470 666 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 KCNMB1Q16558 191 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 RFX4Q33E94 735 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 KRTAP27-1Q3LI81 207 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 THEM4Q5T1C6 240 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 HIST2H3PS2Q5TEC6 136 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 AGAP6Q5VW22 663 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 KRT80Q6KB66 452 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 DPY19L2P2Q6ZN68 376 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 HIST2H3AQ71DI3 136 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 ADCK1Q86TW2 530 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 LRP11Q86VZ4 500 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 AQP12AQ8IXF9 295 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 OR4F15Q8NGB8 312 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 OR4Q3Q8NH05 313 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 NANOS1Q8WY41 292 aaKnown RBP7.46□□□□□ -1.22
SMG6-210ENST00000572205 NSMAFQ92636 917 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 C18orf12Q96KH6 178 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 FOXN4Q96NZ1 517 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 TSSK2Q96PF2 358 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 SNX18Q96RF0 628 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 THTPAQ9BU02 230 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 DGCR6LQ9BY27 220 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 NTN4Q9HB63 628 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 EMC7Q9NPA0 242 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 IL20Q9NYY1 176 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 STX18Q9P2W9 335 aaKnown RBP7.46□□□□□ -1.22
SMG6-210ENST00000572205 EDARQ9UNE0 448 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 ATP23Q9Y6H3 246 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 CDH10Q9Y6N8 788 aa7.46□□□□□ -1.22
SMG6-210ENST00000572205 OR6C68A6NDL8 312 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ARRDC5A6NEK1 342 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 OR6C6A6NF89 314 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 A6NIZ1 184 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 SOCS2O14508 198 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 GSC2O15499 205 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ARHGEF9O43307 516 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 AHCYL1O43865 530 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 NCR1O76036 304 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 MPZL1O95297 269 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 GASTP01350 101 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 CST2P09228 141 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 OR4A8P0C604 315 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 RAP2AP10114 183 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 HIST1H1CP16403 213 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 APEX1P27695 318 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 IFNA8P32881 189 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 GLRXP35754 106 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 SERPINF1P36955 418 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 PPOXP50336 477 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 RAP1BP61224 184 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 RAP1AP62834 184 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 RSPO1Q2MKA7 263 aaPredicted RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 DNAL1Q4LDG9 190 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 PABPC1L2AQ5JQF8 200 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 GPR139Q6DWJ6 353 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 OR2T5Q6IEZ7 315 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 LYPD4Q6UWN0 246 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 CD300LDQ6UXZ3 194 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ASRGL1Q7L266 308 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 SLC16A14Q7RTX9 510 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ZBTB46Q86UZ6 589 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 HS3ST5Q8IZT8 346 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ZCCHC24Q8N2G6 241 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 SVOPLQ8N434 492 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 LRRC18Q8N456 261 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 ZNF525Q8N782 197 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 NPEPL1Q8NDH3 523 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 SLC30A7Q8NEW0 376 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 SLC26A10Q8NG04 563 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 OR2T29Q8NH02 315 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 AKR7LQ8NHP1 331 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 GTF3AQ92664 365 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 MRPL24Q96A35 216 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 SAMD8Q96LT4 415 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 NIPSNAP1Q9BPW8 284 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 NMNAT2Q9BZQ4 307 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 OR2H1Q9GZK4 316 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 NUAK2Q9H093 628 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 RACGAP1Q9H0H5 632 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 LRMDAQ9H2I8 198 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 FN3KQ9H479 309 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 POFUT1Q9H488 388 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 PNRC2Q9NPJ4 139 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 FAIMQ9NVQ4 179 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 MRPL22Q9NWU5 206 aaKnown RBP7.45□□□□□ -1.22
SMG6-210ENST00000572205 IER3IP1Q9Y5U9 82 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 LHFPL6Q9Y693 200 aa7.45□□□□□ -1.22
SMG6-210ENST00000572205 HIVEP2P31629 2446 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 JMJD1CQ15652 2540 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 ATRQ13535 2644 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 DHRS12A0PJE2 317 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 B9A039 149 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 TNFRSF11BO00300 401 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 SYNGR3O43761 229 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 OR10H3O60404 316 aa7.44□□□□□ -1.22
SMG6-210ENST00000572205 DNAJC8O75937 253 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms