RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 ASRGL1Q7L266 308 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 OR2T4Q8NH00 348 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 FBXO17Q96EF6 278 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 RAB3IPQ96QF0 476 aaPredicted RBP12.07□□□□□ -0.48
RPAIN-211ENST00000572174 FEVQ99581 238 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 TSSK6Q9BXA6 273 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 PRRG3Q9BZD7 231 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 OR2H1Q9GZK4 316 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 RERGLQ9H628 205 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 EGLN3Q9H6Z9 239 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 ARMC1Q9NVT9 282 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 KCNG2Q9UJ96 466 aa12.07□□□□□ -0.48
RPAIN-211ENST00000572174 FAM171A2A8MVW0 826 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 H3BN98 237 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 H3BSA7 217 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 BHLHE40O14503 412 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 CD8AP01732 235 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 CD99P14209 185 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 PAICSP22234 425 aaKnown RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 TUBG1P23258 451 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 CDKN1AP38936 164 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 CDKN2AP42771 156 aaKnown RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 PPOXP50336 477 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 HGFACQ04756 655 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 KCNMB1Q16558 191 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 RGS7BPQ6MZT1 257 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 SHQ1Q6PI26 577 aaKnown RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 PTCHD4Q6ZW05 846 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 MYPOPQ86VE0 399 aaPredicted RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 HIPK1Q86Z02 1210 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 ZNF584Q8IVC4 421 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 OR52E2Q8NGJ4 325 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 OR4K13Q8NH42 304 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 DUS3LQ96G46 650 aaKnown RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 COG8Q96MW5 612 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 NMNAT3Q96T66 252 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 ZNF416Q9BWM5 594 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 RAB1BQ9H0U4 201 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 ELOVL3Q9HB03 270 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 RPRD1BQ9NQG5 326 aaKnown RBP12.06□□□□□ -0.48
RPAIN-211ENST00000572174 TUBG2Q9NRH3 451 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 VNN3Q9NY84 501 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 AP4S1Q9Y587 144 aa12.06□□□□□ -0.48
RPAIN-211ENST00000572174 J3QW42 95 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SGCEO43556 437 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 DOK2O60496 412 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 MT-ND5P03915 603 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 GRK5P34947 590 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 NUDT6P53370 316 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 PPP1R8Q12972 351 aaKnown RBP12.05□□□□□ -0.48
RPAIN-211ENST00000572174 ATP6AP1Q15904 470 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SWI5Q1ZZU3 235 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SLC27A4Q6P1M0 643 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 ZFP1Q6P2D0 407 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 ZBTB46Q86UZ6 589 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SVOPLQ8N434 492 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SDR9C7Q8NEX9 313 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 GJC3Q8NFK1 279 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 OR5K1Q8NHB7 308 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 C11orf40Q8WZ69 217 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
RPAIN-211ENST00000572174 OSBPL10Q9BXB5 764 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 HDHD2Q9H0R4 259 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 MS4A5Q9H3V2 200 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 PLEK2Q9NYT0 353 aa12.05□□□□□ -0.48
RPAIN-211ENST00000572174 COA3Q9Y2R0 106 aaPredicted RBP12.05□□□□□ -0.48
RPAIN-211ENST00000572174 FLNAP21333 2647 aaKnown RBP12.05□□□□□ -0.48
RPAIN-211ENST00000572174 IGLV1-36A0A0B4J1U3 117 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 M0R233 179 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 SYNGR3O43761 229 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 TIPRLO75663 272 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 SOX14O95416 240 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 HLA-DQA2P01906 255 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 HMGN1P05114 100 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 OSMP13725 252 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 ZNF823P16415 610 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 APEX1P27695 318 aaKnown RBP12.04□□□□□ -0.48
RPAIN-211ENST00000572174 THBS4P35443 961 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 EFNA4P52798 201 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 PSG4Q00888 419 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 ENDOGQ14249 297 aaKnown RBP12.04□□□□□ -0.48
RPAIN-211ENST00000572174 CLEC2AQ6UVW9 174 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 ZDHHC13Q8IUH4 622 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 NPEPL1Q8NDH3 523 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 PROKR2Q8NFJ6 384 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 OR2AJ1Q8NGZ0 328 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 FGFBP3Q8TAT2 258 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 SNX33Q8WV41 574 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 HTRA1Q92743 480 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 Q96MF0 132 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 NIPSNAP1Q9BPW8 284 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 CDADC1Q9BWV3 514 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 PLA2G12AQ9BZM1 189 aa12.04□□□□□ -0.48
RPAIN-211ENST00000572174 CMC2Q9NRP2 79 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms