RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 ZNF462Q96JM2 2506 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 B8ZZF3 427 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 DVL2O14641 736 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 PHYHO14832 338 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 FARS2O95363 451 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 LIMS3P0CW19 117 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 LIMS4P0CW20 117 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 GNLYP22749 145 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 IGHV1-2P23083 117 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 TUBA4AP68366 448 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF85Q03923 595 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 ENDOGQ14249 297 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 TBCEQ15813 527 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 IGFBP7Q16270 282 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 TMEM154Q6P9G4 183 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 CORO6Q6QEF8 472 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 KCTD8Q6ZWB6 473 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 FJX1Q86VR8 437 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 LRRC18Q8N456 261 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 SLC22A24Q8N4F4 322 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 KLHL36Q8N4N3 616 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 OR2AJ1Q8NGZ0 328 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 THEM6Q8WUY1 208 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 MRPL48Q96GC5 212 aaKnown RBP13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 SH3GL3Q99963 347 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 ALG8Q9BVK2 526 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 MND1Q9BWT6 205 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 ASH2LQ9UBL3 628 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF629Q9UEG4 869 aaPredicted RBP13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 LHFPL6Q9Y693 200 aa13.54□□□□□ -0.24
HERPUD1-219ENST00000570273 A0A096LPE4 126 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 A0A1W2PPZ6 126 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 LYZL6O75951 148 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 PTHP01270 115 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 CST2P09228 141 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 ALOX5APP20292 161 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 COX5AP20674 150 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 UQCRFS1P47985 274 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 TGFBR3Q03167 851 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 GALEQ14376 348 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 NEDD8Q15843 81 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 PCK2Q16822 640 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 NRN1LQ496H8 165 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 FAM27BQ5VT28 67 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 RNLSQ5VYX0 342 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 ZNF322Q6U7Q0 402 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 BEND4Q6ZU67 534 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 SSX6Q7RTT6 188 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 DCXRQ7Z4W1 244 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 LUZP2Q86TE4 346 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 GABRG1Q8N1C3 465 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 OR1K1Q8NGR3 316 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 ASB17Q8WXJ9 295 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 CYB5R1Q9UHQ9 305 aa13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 GDF2Q9UK05 429 aaPredicted RBP13.53□□□□□ -0.24
HERPUD1-219ENST00000570273 TMEM129A0AVI4 362 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 CIB4A0PJX0 185 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 MSTNO14793 375 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 CLPTM1O96005 669 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 CD79BP40259 229 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ACTA2P62736 377 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ACTG2P63267 376 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 EMX1Q04741 257 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 AQP6Q13520 282 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ANKRD16Q6P6B7 361 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF627Q7L945 461 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 OR52N5Q8NH56 324 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 PRR7Q8TB68 274 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 SNX33Q8WV41 574 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 AMELYQ99218 206 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF649Q9BS31 505 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ABHD6Q9BV23 337 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 ACOT13Q9NPJ3 140 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 IKZF2Q9UKS7 526 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 CAB39Q9Y376 341 aaPredicted RBP13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 POLEQ07864 2286 aa13.52□□□□□ -0.25
HERPUD1-219ENST00000570273 PHF3Q92576 2039 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 A0A1B0GUH1 482 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 PRR32B1ATL7 298 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 RAD51DO75771 328 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 LCKP06239 509 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 PCMT1P22061 227 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 CAPZA2P47755 286 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 P2RY6Q15077 328 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 TP53I3Q53FA7 332 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 OR2G6Q5TZ20 316 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF474Q6S9Z5 364 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 ZNF367Q7RTV3 350 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 FAM220AQ7Z4H9 259 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 CXorf67Q86X51 503 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-219ENST00000570273 LIX1LQ8IVB5 337 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms