RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TPK1Q9H3S4 243 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 TIMM10BQ9Y5J6 103 aa11.19□□□□□ -0.62
CNOT1-220ENST00000569916 FN1P02751 2386 aaKnown RBP11.19□□□□□ -0.62
CNOT1-220ENST00000569916 NIPBLQ6KC79 2804 aaeCLIP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 IGLV3-9A0A075B6K5 115 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 C5orf49A4QMS7 147 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 C12orf71A8MTZ7 269 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 NDUFS8O00217 210 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 DCTN6O00399 190 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ARPC3O15145 178 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 KHDRBS3O75525 346 aaKnown RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 LCKP06239 509 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ERCC1P07992 297 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF250P15622 560 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 CCNOP22674 350 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 WNT5AP41221 380 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ALDH3B1P43353 468 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 UCP2P55851 309 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 PPP1R8Q12972 351 aaKnown RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF774Q6NX45 483 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 GLB1L2Q8IW92 636 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ZNF101Q8IZC7 436 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 NEU4Q8WWR8 484 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 SLC7A6OSQ96CW6 309 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 TSSK2Q96PF2 358 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 PIMREGQ9BSJ6 248 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 WACQ9BTA9 647 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 BCL2L14Q9BZR8 327 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 NUAK2Q9H093 628 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 REV1Q9UBZ9 1251 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 DUSP13Q9UII6 198 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 COA3Q9Y2R0 106 aaPredicted RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 TLN2Q9Y4G6 2542 aa11.18□□□□□ -0.62
CNOT1-220ENST00000569916 ANK3Q12955 4377 aaKnown RBP11.18□□□□□ -0.62
CNOT1-220ENST00000569916 A0A1W2PPW3 197 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 LOC390937A0A1W2PQ73 354 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 INAFM1C9JVW0 142 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 ICMTO60725 284 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 MPZL1O95297 269 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 CLPTM1O96005 669 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 DAOP14920 347 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 HIST1H1CP16403 213 aaKnown RBP11.17□□□□□ -0.62
CNOT1-220ENST00000569916 RAD52P43351 418 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 GDI2P50395 445 aaKnown RBP11.17□□□□□ -0.62
CNOT1-220ENST00000569916 TRAP1Q12931 704 aaKnown RBP11.17□□□□□ -0.62
CNOT1-220ENST00000569916 TMEM249Q2WGJ8 235 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 DNAL1Q4LDG9 190 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 FAM98BQ52LJ0 330 aaKnown RBP11.17□□□□□ -0.62
CNOT1-220ENST00000569916 OTPQ5XKR4 325 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 OR2T5Q6IEZ7 315 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 PGM2L1Q6PCE3 622 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 RFPL4BQ6ZWI9 263 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 ADGRG5Q8IZF4 528 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 LINC00471Q8N535 108 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 OR2T29Q8NH02 315 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 POP5Q969H6 163 aaKnown RBP11.17□□□□□ -0.62
CNOT1-220ENST00000569916 LRGUKQ96M69 825 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 SNX18Q96RF0 628 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 IFT27Q9BW83 186 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 MS4A5Q9H3V2 200 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 RERGLQ9H628 205 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 EGLN3Q9H6Z9 239 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 CDH10Q9Y6N8 788 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 CSPG4Q6UVK1 2322 aa11.17□□□□□ -0.62
CNOT1-220ENST00000569916 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 IGLV1-36A0A0B4J1U3 117 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 CD5LO43866 347 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 DOK2O60496 412 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 CCNB2O95067 398 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 STAMBPO95630 424 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 GPANK1O95872 356 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 GASTP01350 101 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 RAP2AP10114 183 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 GAAP10253 952 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 COX5BP10606 129 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 CRABP1P29762 137 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 NR4A2P43354 598 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 KLF3P57682 345 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-220ENST00000569916 LSM6P62312 80 aaKnown RBP11.16□□□□□ -0.62
CNOT1-220ENST00000569916 SCRN3Q0VDG4 424 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 DBPQ10586 325 aaPredicted RBP11.16□□□□□ -0.62
CNOT1-220ENST00000569916 AQP6Q13520 282 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 KCNMB1Q16558 191 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 CARTPTQ16568 116 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 TMEM255AQ5JRV8 349 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 DNM1P34Q6PK57 102 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 JAZF1Q86VZ6 243 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 AQP11Q8NBQ7 271 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 OR8D4Q8NGM9 314 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 OR4K13Q8NH42 304 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 SYNPRQ8TBG9 265 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 C11orf40Q8WZ69 217 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 NMNAT3Q96T66 252 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 PLA2G12AQ9BZM1 189 aa11.16□□□□□ -0.62
CNOT1-220ENST00000569916 BPESC1Q9GZL8 116 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms