RNA–Protein interactions for RNA: ENST00000568329.5

CSK-211, Transcript of C-terminal Src kinase, human

TSL 5

Gene CSK, Length 1,552 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-211	ENST00000568329	SLC16A12	Q6ZSM3	486 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ATCAY	Q86WG3	371 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF679	Q8IYX0	411 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	RFLNB	Q8N5W9	214 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	OR2AJ1	Q8NGZ0	328 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	C12orf43	Q96C57	262 aa	Known RBP	13.6	□□□□□ -0.23
CSK-211	ENST00000568329	PELI1	Q96FA3	418 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	FOXN4	Q96NZ1	517 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	OR8B4	Q96RC9	309 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	WAC	Q9BTA9	647 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	ABHD6	Q9BV23	337 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	C1orf198	Q9H425	327 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	CRLF2	Q9HC73	371 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329	IKZF2	Q9UKS7	526 aa		13.6	□□□□□ -0.23
CSK-211	ENST00000568329		H3BMQ9	156 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	RPL36A-HNRNPH2	H7BZ11	118 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	PLPP2	O43688	288 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	UPK3A	O75631	287 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	MPZL1	O95297	269 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	CD1A	P06126	327 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	CEL	P19835	753 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	GAL	P22466	123 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	SIRPA	P78324	504 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	PHYHD1	Q5SRE7	291 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF544	Q6NX49	715 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	RPL22L1	Q6P5R6	122 aa	Known RBP	13.59	□□□□□ -0.23
CSK-211	ENST00000568329	PLXDC2	Q6UX71	529 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF100	Q8IYN0	542 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	FAM57A	Q8TBR7	257 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.59	□□□□□ -0.23
CSK-211	ENST00000568329	SIAE	Q9HAT2	523 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	STUB1	Q9UNE7	303 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	KLHDC2	Q9Y2U9	406 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	EMC9	Q9Y3B6	208 aa		13.59	□□□□□ -0.23
CSK-211	ENST00000568329	ZNF587B	E7ETH6	402 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	HLA-DPB1	P04440	258 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	EDN3	P14138	238 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	ABO	P16442	354 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	CTF1	Q16619	201 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	TSPO2	Q5TGU0	170 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	FAM27B	Q5VT28	67 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	GFRAL	Q6UXV0	394 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	DCXR	Q7Z4W1	244 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	KRT77	Q7Z794	578 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	CD163	Q86VB7	1156 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	YIPF7	Q8N8F6	280 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	ST7L	Q8TDW4	575 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	ZFP3	Q96NJ6	502 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	NAA50	Q9GZZ1	169 aa	Known RBP	13.58	□□□□□ -0.23
CSK-211	ENST00000568329	GPR35	Q9HC97	309 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	ACOXL	Q9NUZ1	547 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	TMEM38B	Q9NVV0	291 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	UPB1	Q9UBR1	384 aa		13.58	□□□□□ -0.23
CSK-211	ENST00000568329	MRM2	Q9UI43	246 aa	Known RBP	13.58	□□□□□ -0.23
CSK-211	ENST00000568329	OGG1	O15527	345 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	FARS2	O95363	451 aa	Known RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	CNOT4	O95628	575 aa	Known RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	ABHD16A	O95870	558 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	LALBA	P00709	142 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	TPO	P07202	933 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	GADD45A	P24522	165 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	CDA	P32320	146 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	DCTD	P32321	178 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	RPS27	P42677	84 aa	Known RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	RIDA	P52758	137 aa	Known RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	ROR2	Q01974	943 aa	Known RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	AQP6	Q13520	282 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	DOC2B	Q14184	412 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	CDK5R1	Q15078	307 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	SGCA	Q16586	387 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	CNPY1	Q3B7I2	92 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	LIPN	Q5VXI9	398 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	DMKN	Q6E0U4	476 aa	Predicted RBP	13.58	□□□□□ -0.24
CSK-211	ENST00000568329	ZNF585A	Q6P3V2	769 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	FAM214B	Q7L5A3	538 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	MS4A15	Q8N5U1	240 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	RNF133	Q8WVZ7	376 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	SMIM19	Q96E16	107 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	FOXB1	Q99853	325 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	TTTY10	Q9BZA0	68 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	NIPAL2	Q9H841	368 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	CLEC4A	Q9UMR7	237 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	SSR3	Q9UNL2	185 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	ZNF835	Q9Y2P0	537 aa		13.58	□□□□□ -0.24
CSK-211	ENST00000568329	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSK-211	ENST00000568329	MBD3L3	A6NE82	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSK-211	ENST00000568329	TRIM64B	A6NI03	449 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSK-211	ENST00000568329	GPRIN2	O60269	458 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	CRH	P06850	196 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	OR8G3P	P0DMU2	310 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	OR3A2	P47893	321 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	SH3BGR	P55822	239 aa	Predicted RBP	13.57	□□□□□ -0.24
CSK-211	ENST00000568329	GUSBP1	Q15486	140 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	CEACAM16	Q2WEN9	425 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	SYT9	Q86SS6	491 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	GJC3	Q8NFK1	279 aa		13.57	□□□□□ -0.24
CSK-211	ENST00000568329	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.57	□□□□□ -0.24
CSK-211	ENST00000568329	NABP1	Q96AH0	204 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms