RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CPEB3Q8NE35 698 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 OR1J1Q8NGS3 322 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 SLC7A13Q8TCU3 470 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 SNX33Q8WV41 574 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 C11orf40Q8WZ69 217 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 NSMAFQ92636 917 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 RDH5Q92781 318 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FAM46AQ96IP4 442 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 POM121L2Q96KW2 1035 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 C7orf34Q96L11 122 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 DHRS1Q96LJ7 313 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 DMRTB1Q96MA1 342 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 SNX18Q96RF0 628 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 GPX7Q96SL4 187 aaPredicted RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 MDFIQ99750 246 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 WACQ9BTA9 647 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 BEX2Q9BXY8 128 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 SHARPINQ9H0F6 387 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 OR51B6Q9H340 312 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 GORASP2Q9H8Y8 452 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 CHODLQ9H9P2 273 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 KRCC1Q9NPI7 259 aaPredicted RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 HINT3Q9NQE9 182 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 DCAF13Q9NV06 445 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 PGPEP1Q9NXJ5 209 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 NDUFAF4Q9P032 175 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 TAAR3PQ9P1P4 343 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 MYEF2Q9P2K5 600 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 EIF3KQ9UBQ5 218 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 GRHPRQ9UBQ7 328 aa4.1□□□□□ -1.75
CLK3-219ENST00000567805 FAM32AQ9Y421 112 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 SONP18583 2426 aaKnown RBP4.1□□□□□ -1.75
CLK3-219ENST00000567805 RTTNQ86VV8 2226 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 JMJD1CQ15652 2540 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LOC100509620A0A075B734 347 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 TEX13CA0A0J9YWL9 993 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PRSS37A4D1T9 235 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 C5orf49A4QMS7 147 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LRP5LA4QPB2 252 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 C12orf71A8MTZ7 269 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LYNX1G3V0Z9 82 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PTP4A3O75365 173 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 DCTN3O75935 186 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 NCR1O76036 304 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 NDUFB2O95178 105 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 TGFAP01135 160 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SEMG1P04279 462 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LYNX1P0DP58 116 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 COX5BP10606 129 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ZNF26P17031 533 aaPredicted RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 SRD5A1P18405 259 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 TCN1P20061 433 aaPredicted RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 MSR1P21757 451 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PCMT1P22061 227 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 CCNOP22674 350 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 IGFBP5P24593 272 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 COL8A2P25067 703 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 GCH1P30793 250 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SDHAP31040 664 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LIPAP38571 399 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 WNT5AP41221 380 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 GPR6P46095 362 aaPredicted RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 OMPP47874 163 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LIMS1P48059 325 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ARHGDIAP52565 204 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 TMEM33P57088 247 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SMIM11AP58511 58 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ERVS71-1P61550 626 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PSG4Q00888 419 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 TEKQ02763 1124 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SCRN3Q0VDG4 424 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 KRR1Q13601 381 aaKnown RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 ENDOGQ14249 297 aaKnown RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 TRIP10Q15642 601 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 C11orf91Q3C1V1 193 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ALKBH6Q3KRA9 238 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ZNF718Q3SXZ3 478 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SPATS1Q496A3 300 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 MESTQ5EB52 335 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 FAM209AQ5JX71 171 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SAMD4BQ5PRF9 694 aaKnown RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 FAM120AOSQ5T036 256 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 MBNL2Q5VZF2 373 aaKnown RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 GPR139Q6DWJ6 353 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ARL9Q6T311 187 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 DPY19L2P2Q6ZN68 376 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 FAM122BQ7Z309 247 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PIGWQ7Z7B1 504 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ADCK1Q86TW2 530 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 PGAM4Q8N0Y7 254 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 RNF148Q8N7C7 305 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 FAM86B1Q8N7N1 296 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 LINC01356Q8N9X3 169 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 ICA1LQ8NDH6 482 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 AKR7LQ8NHP1 331 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 SPATA3Q8NHX4 192 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 MCUR1Q96AQ8 359 aa4.09□□□□□ -1.75
CLK3-219ENST00000567805 MARS2Q96GW9 593 aaKnown RBP4.09□□□□□ -1.75
CLK3-219ENST00000567805 C1orf159Q96HA4 380 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms