RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PPP1R8Q12972 351 aaKnown RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 RIPK1Q13546 671 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 DCTN2Q13561 401 aaKnown RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 ATP6AP1Q15904 470 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 HFEQ30201 348 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 DEFB112Q30KQ8 113 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 ENTPD8Q5MY95 495 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 TSPO2Q5TGU0 170 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 OR2T5Q6IEZ7 315 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 TMEM154Q6P9G4 183 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 TMPPEQ6ZT21 453 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 PIWIL3Q7Z3Z3 882 aaKnown RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 CYP4Z1Q86W10 505 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 CADM2Q8N3J6 435 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 POMGNT2Q8NAT1 580 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 ICA1LQ8NDH6 482 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 OR2T29Q8NH02 315 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 TBC1D15Q8TC07 691 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 BOD1Q96IK1 185 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 FAM71F1Q96KD3 344 aaPredicted RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 PRRC1Q96M27 445 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 TBX15Q96SF7 602 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 STX18Q9P2W9 335 aaKnown RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 RIMS3Q9UJD0 308 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 FAM32AQ9Y421 112 aaKnown RBP8.2□□□□□ -1.1
CAPN3-216ENST00000567071 U3KQV3 271 aa8.2□□□□□ -1.1
CAPN3-216ENST00000567071 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 TRAV40A0A0B4J280 105 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 IGHV1-69-2A0A0G2JMI3 117 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RBMY1BA6NDE4 496 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RBMY1EA6NEQ0 496 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 E9PQ18 207 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 GNGT2O14610 69 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 FFAR1O14842 300 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 E2F6O75461 281 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 IGKV3-15P01624 115 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RBMY1DP0C7P1 496 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 TFPIP10646 304 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 PRKCAP17252 672 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 HOXB6P17509 224 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RHCEP18577 417 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RRM2P31350 389 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 ACAA2P42765 397 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 EPS8Q12929 822 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 NPRL3Q12980 569 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 CDK5R2Q13319 367 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 PIN1Q13526 163 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 MAD2L1BPQ15013 274 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 NKPD1Q17RQ9 610 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 PCGF3Q3KNV8 242 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 FGD3Q5JSP0 725 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF440Q8IYI8 595 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 OR1K1Q8NGR3 316 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 OR52J3Q8NH60 311 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 MUC7Q8TAX7 377 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 ADAMTS16Q8TE57 1224 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SLC25A43Q8WUT9 341 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SSMEM1Q8WWF3 244 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF347Q96SE7 839 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 FNDC11Q9BVV2 318 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 LAT2Q9GZY6 243 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 PRDM13Q9H4Q3 707 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 REEP1Q9H902 201 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SEC61A2Q9H9S3 476 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 NOX3Q9HBY0 568 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 PALMDQ9NP74 551 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 EXOSC3Q9NQT5 275 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 MMP26Q9NRE1 261 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 DNAJB9Q9UBS3 223 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 A4GNTQ9UNA3 340 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SAMHD1Q9Y3Z3 626 aaKnown RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 INSIG2Q9Y5U4 225 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 SPIN1Q9Y657 262 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-216ENST00000567071 RYR1P21817 5038 aa8.19□□□□□ -1.1
CAPN3-216ENST00000567071 A0A1B0GWA3 101 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 ZNF587BE7ETH6 402 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 DNPH1O43598 174 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TRAF3IP2O43734 574 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 GPR137BO60478 399 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 EIF4E2O60573 245 aaKnown RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 FMO6PO60774 539 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 OR5F1O95221 314 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 PLATP00750 562 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 H1F0P07305 194 aaKnown RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 PPIAL4GP0DN37 164 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 NAT2P11245 290 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 UQCRBP14927 111 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 PEX2P28328 305 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 NTF4P34130 210 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 CRYBB2P43320 205 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 IDH2P48735 452 aaKnown RBP8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SELENOVP59797 346 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 COPZ1P61923 177 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TUBA1BP68363 451 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 TUBA4AP68366 448 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 CCL8P80075 99 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SLC34A1Q06495 639 aa8.18□□□□□ -1.1
CAPN3-216ENST00000567071 SLC3A1Q07837 685 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms