RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 USP34Q70CQ2 3546 aa4.52□□□□□ -1.69
KARS-208ENST00000566772 PLXNA4Q9HCM2 1894 aa4.52□□□□□ -1.69
KARS-208ENST00000566772 COL4A6Q14031 1691 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ZNF318Q5VUA4 2279 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 IGHV3OR16-10A0A075B7F0 116 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SMIM28A0A1B0GU29 152 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 PRR23AA6NEV1 266 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 DHRS7CA6NNS2 312 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SHISA9B4DS77 424 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 M0QZ92 97 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 M0R3G1 203 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 PSMD11O00231 422 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ZBTB5O15062 677 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ZNF253O75346 499 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 FCN3O75636 299 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 FGF1P05230 155 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 C2P06681 752 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TRIM49P0CI25 452 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TRIM49CP0CI26 452 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ATP6V1B2P21281 511 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 CD9P21926 228 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SLC2A5P22732 501 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SHMT2P34897 504 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 NOVP48745 357 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 PLK1P53350 603 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 CRISP1P54107 249 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 CLDN18P56856 261 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ERVK-25P63136 954 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TLE4Q04727 773 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ELAVL2Q12926 359 aaKnown RBP4.51□□□□□ -1.69
KARS-208ENST00000566772 ALX1Q15699 326 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 PARP15Q460N3 678 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 STUMQ69YW2 141 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 C1orf94Q6P1W5 598 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TRIM40Q6P9F5 258 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 MBOAT1Q6ZNC8 495 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ZNF600Q6ZNG1 722 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 USP43Q70EL4 1123 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 FRA10AC1Q70Z53 315 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 MRPL21Q7Z2W9 205 aaKnown RBP4.51□□□□□ -1.69
KARS-208ENST00000566772 HDDC2Q7Z4H3 204 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 PRR22Q8IZ63 422 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TCAIMQ8N3R3 496 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 LIX1Q8N485 282 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 TRIML2Q8N7C3 387 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 OR2G2Q8NGZ5 317 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 LYPD6BQ8NI32 183 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SLC7A13Q8TCU3 470 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 SH3GL1Q99961 368 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 BARHL1Q9BZE3 327 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 UCK2Q9BZX2 261 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 GAL3ST2Q9H3Q3 398 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 RETNQ9HD89 108 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 UXTQ9UBK9 157 aaPredicted RBP4.51□□□□□ -1.69
KARS-208ENST00000566772 UBQLN1Q9UMX0 589 aaKnown RBP4.51□□□□□ -1.69
KARS-208ENST00000566772 GINS2Q9Y248 185 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 CACNA1AO00555 2505 aa4.51□□□□□ -1.69
KARS-208ENST00000566772 ZDBF2Q9HCK1 2354 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 MYO7AQ13402 2215 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 A0A1B0GU03 582 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 ERICH2A1L162 156 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 PRSS37A4D1T9 235 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 PRR23D1E9PI22 279 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 YKT6O15498 198 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 RRP8O43159 456 aaKnown RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 SOX15O60248 233 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 EIF4E2O60573 245 aaKnown RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 IFNW1P05000 195 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 KLK3P07288 261 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 PRR23D2P0DMB1 279 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 IGLL1P15814 213 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 CD82P27701 267 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 CD52P31358 61 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 TFPI2P48307 235 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 UBE2MP61081 183 aaKnown RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 PAX8Q06710 450 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 TRDNQ13061 729 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 SLAQ13239 276 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 FAM83EQ2M2I3 478 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 HSP90AA4PQ58FG1 418 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 KLF17Q5JT82 389 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 MARCH8Q5T0T0 291 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 H3F3CQ6NXT2 135 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 METTL7BQ6UX53 244 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 C17orf82Q86X59 251 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 PLA2G4DQ86XP0 818 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 HIPK1Q86Z02 1210 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 NAXDQ8IW45 347 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 GPR65Q8IYL9 337 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 FAM58AQ8N1B3 248 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 EID2Q8N6I1 236 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 FAM86B1Q8N7N1 296 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 TTC29Q8NA56 475 aaPredicted RBP4.5□□□□□ -1.69
KARS-208ENST00000566772 FNDC5Q8NAU1 212 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 TMEM104Q8NE00 496 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 OR51L1Q8NGJ5 315 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 OR5B3Q8NH48 314 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 DNAJB3Q8WWF6 145 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 MYDGFQ969H8 173 aa4.5□□□□□ -1.69
KARS-208ENST00000566772 MSANTD3Q96H12 275 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms