RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 SLC26A10Q8NG04 563 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 PKP2Q99959 881 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 SEMA6AQ9H2E6 1030 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 KRT84Q9NSB2 600 aa18.25■□□□□ 0.51
SHCBP1-205ENST00000566016 ITPR3Q14573 2671 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 CELSR1Q9NYQ6 3014 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 AKAP9Q99996 3911 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 IQCMA0A1B0GVH7 501 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 SCG5P05408 212 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 POU1F1P28069 291 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 PPP2R2BQ00005 443 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 PSG4Q00888 419 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 SCRN3Q0VDG4 424 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 GINS1Q14691 196 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 IQCF1Q8N6M8 205 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 CYB561A3Q8NBI2 242 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 SLC30A7Q8NEW0 376 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 OR2H1Q9GZK4 316 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 ZNF442Q9H7R0 627 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 S100A14Q9HCY8 104 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 SRA1Q9HD15 236 aaKnown RBP18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 EMC7Q9NPA0 242 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 CA10Q9NS85 328 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 ATP23Q9Y6H3 246 aa18.24■□□□□ 0.51
SHCBP1-205ENST00000566016 HMGN1P05114 100 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 TTKP33981 857 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 NKX6-1P78426 367 aaPredicted RBP18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 HGFACQ04756 655 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 DEFB113Q30KQ7 82 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 UGT2A3Q6UWM9 527 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 ALDH16A1Q8IZ83 802 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 OR1J2Q8NGS2 313 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 TMEM171Q8WVE6 324 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 C11orf40Q8WZ69 217 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 FOXC2Q99958 501 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 TEX12Q9BXU0 123 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 FN3KQ9H479 309 aa18.23■□□□□ 0.51
SHCBP1-205ENST00000566016 SOD3P08294 240 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 PAX1P15863 534 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 NR4A1P22736 598 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 APOBEC3AP31941 199 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 CRISP1P54107 249 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 TBC1D28Q2M2D7 210 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 AGAP6Q5VW22 663 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 ACSM5Q6NUN0 579 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 ICA1LQ8NDH6 482 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 CPEB3Q8NE35 698 aaKnown RBP18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 FOXN4Q96NZ1 517 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 RBM4BQ9BQ04 359 aaKnown RBP18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 WNT5BQ9H1J7 359 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 CXXC4Q9H2H0 198 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 CXorf56Q9H5V9 222 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 ATPIF1Q9UII2 106 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 TMEFF2Q9UIK5 374 aaPredicted RBP18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 KCNG2Q9UJ96 466 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 SPEF1Q9Y4P9 236 aa18.22■□□□□ 0.51
SHCBP1-205ENST00000566016 OVOL3O00110 214 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 SURF4O15260 269 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 MPZL1O95297 269 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 COX5BP10606 129 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 PAICSP22234 425 aaKnown RBP18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 IGFBP5P24593 272 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 STOMP27105 288 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 CENPAP49450 140 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 FBXL14Q8N1E6 418 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 MUC15Q8N387 334 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 PROKR2Q8NFJ6 384 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 STMN2Q93045 179 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 CIB1Q99828 191 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 TRAF4Q9BUZ4 470 aaPredicted RBP18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 ASH2LQ9UBL3 628 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 LAMP3Q9UQV4 416 aa18.21■□□□□ 0.51
SHCBP1-205ENST00000566016 ICMTO60725 284 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 TFP02787 698 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 SPI1P17947 270 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 APEX1P27695 318 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 PCSK6P29122 969 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 APLNRP35414 380 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 FABP6P51161 128 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 BLVRAP53004 296 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 GALK2Q01415 458 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 SNTB2Q13425 540 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 DAG1Q14118 895 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 LRRC75A-AS1Q8N1F1 130 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 PQLC1Q8N2U9 271 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 POM121L2Q96KW2 1035 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 PRRG3Q9BZD7 231 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 CDH20Q9HBT6 801 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 CBLN4Q9NTU7 201 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 ZNF701Q9NV72 531 aaPredicted RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 POLR1DQ9Y2S0 133 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 LHFPL6Q9Y693 200 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 SAC3D1A6NKF1 404 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 SGCEO43556 437 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 CD8AP01732 235 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 RPS23P62266 143 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 HIST1H3AP68431 136 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 TEKQ02763 1124 aa18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 PTGES3Q15185 160 aaKnown RBP18.2■□□□□ 0.5
SHCBP1-205ENST00000566016 HIST2H3PS2Q5TEC6 136 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms