RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 C20orf196Q8IYI0 205 aa17.35■□□□□ 0.37
CLN6-205ENST00000564846 PPIL3Q9H2H8 161 aaKnown RBP17.35■□□□□ 0.37
CLN6-205ENST00000564846 FOXD3Q9UJU5 478 aaPredicted RBP17.35■□□□□ 0.37
CLN6-205ENST00000564846 TRAV17A0A0B4J275 112 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 CFL1P23528 166 aaKnown RBP17.34■□□□□ 0.37
CLN6-205ENST00000564846 GUCA1AP43080 201 aaPredicted RBP17.34■□□□□ 0.37
CLN6-205ENST00000564846 SELENOPP49908 381 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 LINC00346Q8IVM7 164 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 RNF133Q8WVZ7 376 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 COMMD4Q9H0A8 199 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 C1orf198Q9H425 327 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 ZDHHC11Q9H8X9 412 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 LRP12Q9Y561 859 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 CSAG2Q9Y5P2 127 aa17.34■□□□□ 0.37
CLN6-205ENST00000564846 TRAV1-2A0A0B4J238 106 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 OR4C45A6NMZ5 311 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 UCHL1P09936 223 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 SRYQ05066 204 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 FAM27D1Q5T7N8 215 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 OR7E24Q6IFN5 339 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 SPATC1Q76KD6 591 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 C4orf45Q96LM5 186 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 SMAD5Q99717 465 aaKnown RBP17.33■□□□□ 0.37
CLN6-205ENST00000564846 POLE4Q9NR33 117 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 UGT2A1Q9Y4X1 527 aa17.33■□□□□ 0.37
CLN6-205ENST00000564846 ZNF879B4DU55 563 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 J3QRK9 145 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 TAF4O00268 1085 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 CTDSP2O14595 271 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 SLC43A1O75387 559 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 SYNGR4O95473 234 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 CDAP32320 146 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 ZNF45Q02386 682 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 PHYHD1Q5SRE7 291 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 C16orf87Q6PH81 154 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 AAED1Q7RTV5 226 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 PRSS35Q8N3Z0 413 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 OR2AJ1Q8NGZ0 328 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 CEP19Q96LK0 163 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 OR14A2Q96R54 314 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 LDAHQ9H6V9 325 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 POLR1DQ9Y2S0 133 aa17.33■□□□□ 0.36
CLN6-205ENST00000564846 KIAA1549Q9HCM3 1950 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 ARPC4-TTLL3A0A0A6YYG9 625 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 TRGV5A0A0B4J1U4 118 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 RGS5O15539 181 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 DHHO43323 396 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 MAPK3P27361 379 aaPredicted RBP17.32■□□□□ 0.36
CLN6-205ENST00000564846 ETV6P41212 452 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 CAV3P56539 151 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 LSM6P62312 80 aaKnown RBP17.32■□□□□ 0.36
CLN6-205ENST00000564846 WDR38Q5JTN6 314 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 RNFT1Q5M7Z0 435 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 CORO6Q6QEF8 472 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 FOXL2NBQ6ZUU3 175 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 RHOUQ7L0Q8 258 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.32■□□□□ 0.36
CLN6-205ENST00000564846 RGP1Q92546 391 aaPredicted RBP17.32■□□□□ 0.36
CLN6-205ENST00000564846 SLAMF6Q96DU3 332 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 ULBP2Q9BZM5 246 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 DEFB127Q9H1M4 99 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 EMC7Q9NPA0 242 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 MCTS1Q9ULC4 181 aaKnown RBP17.32■□□□□ 0.36
CLN6-205ENST00000564846 LHFPL6Q9Y693 200 aa17.32■□□□□ 0.36
CLN6-205ENST00000564846 IGKV3D-15A0A087WSY6 115 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 A0A1B0GTH9 108 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 SMIM30A4D0T7 59 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 GPR171O14626 319 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 WNT11O96014 354 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 ITGB2P05107 769 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 H2BFMP0C1H6 154 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 CD40LGP29965 261 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 ZNF84P51523 738 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 Q499Y3 187 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 HSD17B12Q53GQ0 312 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 CCDC190Q86UF4 302 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 ZNF676Q8N7Q3 588 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 ABHD3Q8WU67 409 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 THRSPQ92748 146 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 TMEM45BQ96B21 275 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 WDFY2Q96P53 400 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 NELFAQ9H3P2 528 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 EXO5Q9H790 373 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 GDF2Q9UK05 429 aaPredicted RBP17.31■□□□□ 0.36
CLN6-205ENST00000564846 CMAHPQ9Y471 501 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 LIPGQ9Y5X9 500 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 R4GMQ9 66 aa17.31■□□□□ 0.36
CLN6-205ENST00000564846 PNPP00491 289 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 MSR1P21757 451 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 DCTDP32321 178 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 SPANXN2Q5MJ10 180 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 SNIP1Q8TAD8 396 aaKnown RBP17.3■□□□□ 0.36
CLN6-205ENST00000564846 GPR148Q8TDV2 347 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 ZNF775Q96BV0 537 aaPredicted RBP17.3■□□□□ 0.36
CLN6-205ENST00000564846 SCNM1Q9BWG6 230 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 CENPMQ9NSP4 180 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 B3GNT3Q9Y2A9 372 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 TRBV5-5A0A0J9YX44 114 aa17.3■□□□□ 0.36
CLN6-205ENST00000564846 TFECO14948 347 aaPredicted RBP17.3■□□□□ 0.36
CLN6-205ENST00000564846 SRSF10O75494 262 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms