RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TSTQ16762 297 aaKnown RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 C11orf91Q3C1V1 193 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 SLC18B1Q6NT16 456 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 VWA1Q6PCB0 445 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 VASH1Q7L8A9 365 aaPredicted RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 DCXRQ7Z4W1 244 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 SYS1Q8N2H4 156 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 CNEP1R1Q8N9A8 125 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ZNF454Q8N9F8 522 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ST7LQ8TDW4 575 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 SNX33Q8WV41 574 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 WBP1Q96G27 269 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 FOXB1Q99853 325 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ZNF416Q9BWM5 594 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 CDADC1Q9BWV3 514 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 TP63Q9H3D4 680 aaPredicted RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 ISYNA1Q9NPH2 558 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 BABAM2Q9NXR7 383 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 SLCO1C1Q9NYB5 712 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 UPB1Q9UBR1 384 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 MRM2Q9UI43 246 aaKnown RBP8.94□□□□□ -0.98
SMG1-208ENST00000563448 EMC9Q9Y3B6 208 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 CEPT1Q9Y6K0 416 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ACACBO00763 2458 aa8.94□□□□□ -0.98
SMG1-208ENST00000563448 ZNF587BE7ETH6 402 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 E9PI62 339 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TNFSF13O75888 250 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ABHD16AO95870 558 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 MT-ND5P03915 603 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 OR8G3PP0DMU2 310 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 NPR2P20594 1047 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TTKP33981 857 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TIMP3P35625 211 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 GUCA1AP43080 201 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 EGR3Q06889 387 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 SSX1Q16384 188 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ST3GAL2Q16842 350 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 FAM27BQ5VT28 67 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 FBXW9Q5XUX1 488 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TFAP2EQ6VUC0 442 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 UBE2J2Q8N2K1 259 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 LRRC18Q8N456 261 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ZFP41Q8N8Y5 198 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 NAXEQ8NCW5 288 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 OR10S1Q8NGN2 331 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 OR6K3Q8NGY3 331 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 PELI1Q96FA3 418 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 MAP6Q96JE9 813 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 OR8B4Q96RC9 309 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TTYH2Q9BSA4 534 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 NAA50Q9GZZ1 169 aaKnown RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 SIAEQ9HAT2 523 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 GNG8Q9UK08 70 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ATRXP46100 2492 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TPRP12270 2363 aaKnown RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 SMIM31A0A1B0GVY4 71 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 METTL15A6NJ78 407 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TMCC2O75069 709 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TMIGD3P0DMS9 266 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 GLI4P10075 376 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 B4GALT1P15291 398 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 CPEP16870 476 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 CEACAM8P31997 349 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 RGS6P49758 472 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 PER3P56645 1201 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ARF1P84077 181 aaKnown RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 RBPJQ06330 500 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 C9orf135Q5VTT2 229 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 LRRN1Q6UXK5 716 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 CFAP77Q6ZQR2 320 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 PLEKHG7Q6ZR37 379 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 SPATC1Q76KD6 591 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 BTLAQ7Z6A9 289 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ATCAYQ86WG3 371 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 CLVS1Q8IUQ0 354 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 SLC22A24Q8N4F4 322 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 OR52N5Q8NH56 324 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ASB17Q8WXJ9 295 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 RNF166Q96A37 237 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 STARD4Q96DR4 205 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 MRPL48Q96GC5 212 aaKnown RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 SH3GL3Q99963 347 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 FUNDC2Q9BWH2 189 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 PLSCR4Q9NRQ2 329 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ACOXLQ9NUZ1 547 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 ASH2LQ9UBL3 628 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 MALT1Q9UDY8 824 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 TINAGQ9UJW2 476 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 GDF2Q9UK05 429 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 GRIP1Q9Y3R0 1128 aa8.93□□□□□ -0.98
SMG1-208ENST00000563448 SIRT4Q9Y6E7 314 aaPredicted RBP8.93□□□□□ -0.98
SMG1-208ENST00000563448 CCRL2O00421 344 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 LRRTM2O43300 516 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 SULT1C4O75897 302 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 CGAP01215 116 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 IL2RAP01589 272 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 KRT8P05787 483 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 CRHP06850 196 aa8.92□□□□□ -0.98
SMG1-208ENST00000563448 ITGA5P08648 1049 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms