RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 EGLN3Q9H6Z9 239 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 FTSJ1Q9UET6 329 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 UBR2Q8IWV8 1755 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 MBPP02686 304 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 SGCGQ13326 291 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 MEP1BQ16820 701 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 EMID1Q96A84 441 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 CAPNS2Q96L46 248 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 F2RL3Q96RI0 385 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CNOT4O95628 575 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 F3P13726 295 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PIP5KL1Q5T9C9 394 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 LEG1Q6P5S2 330 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PRSS45Q7RTY3 260 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CELF5Q8N6W0 485 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR10P1Q8NGE3 313 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 C2orf15Q8WU43 125 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 DOK5Q9P104 306 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NAT8Q9UHE5 227 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 DCDC2BA2VCK2 349 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CD300LBA8K4G0 201 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 KLK8O60259 260 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 CTSAP10619 480 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 LIPCP11150 499 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 HOXA5P20719 270 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 AADACP22760 399 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SLC6A9P48067 706 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 RPS26P62854 115 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 TECPR1Q7Z6L1 1165 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 SLC22A24Q8N4F4 322 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 NINJ1Q92982 152 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 C1QTNF6Q9BXI9 259 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 AMDHD2Q9Y303 409 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 FOXE1O00358 373 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 PLPP2O43688 288 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GLSO94925 669 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 TK1P04183 234 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 GAPDHP04406 335 aaKnown RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 EMP2P54851 167 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 ARF6P62330 175 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 Q5BKY6 102 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 LRRC25Q8N386 305 aaPredicted RBP5.75□□□□□ -1.49
CLK3-212ENST00000563418 OR52B4Q8NGK2 314 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PISDQ9UG56 409 aa5.75□□□□□ -1.49
CLK3-212ENST00000563418 PRAMEF27A3QJZ7 478 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PRAMEF25A6NGN4 478 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TARM1B6A8C7 271 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 J3KTA2 159 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 M0QYG6 137 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PRAMEF4O60810 478 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 MTX2O75431 263 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 IL12BP29460 328 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SRP14P37108 136 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 PRAMEF9Q5VWM5 478 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 FOXJ1Q92949 421 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ISOC2Q96AB3 205 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 TCTN2Q96GX1 697 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC35E1Q96K37 410 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 RHBGQ9H310 441 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 BANF2Q9H503 90 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 CENPMQ9NSP4 180 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PIAS3Q9Y6X2 628 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ADAMTSL3P82987 1691 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 UPK1AO00322 258 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 GABRA4P48169 554 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PMCHL1Q16048 86 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC35G1Q2M3R5 365 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 C6orf132Q5T0Z8 1188 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 DLK2Q6UY11 383 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 HFE2Q6ZVN8 426 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NPWQ8N729 165 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 OR2T10Q8NGZ9 312 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NDRG1Q92597 394 aaKnown RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 DVL3Q92997 716 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 ANKRD9Q96BM1 317 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 OR51B6Q9H340 312 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NUP214P35658 2090 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 ATF1P18846 271 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 MSX1P28360 303 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 PSAPL1Q6NUJ1 521 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NHLRC2Q8NBF2 726 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 OR4D6Q8NGJ1 314 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC38A5Q8WUX1 472 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 CRYGNQ8WXF5 182 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 KLRG1Q96E93 195 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 COPS7AQ9UBW8 275 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 KLF2Q9Y5W3 355 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 PEX12O00623 359 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 DLEU1O43261 78 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 GPNMBQ14956 572 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 LIMS2Q7Z4I7 341 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 WDR5BQ86VZ2 330 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 AMZ2Q86W34 360 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 MTMR14Q8NCE2 650 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 STARD4Q96DR4 205 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 GPR55Q9Y2T6 319 aaPredicted RBP5.74□□□□□ -1.49
CLK3-212ENST00000563418 TTC3P53804 2025 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 NPIPA5A0A0B4J1W7 369 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 SLC17A3O00476 420 aa5.74□□□□□ -1.49
CLK3-212ENST00000563418 ERI3O43414 337 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms