RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 OR4F21O95013 312 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 CDS2O95674 445 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GIPP09681 153 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 TM4SF1P30408 202 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SULT1A1P50225 295 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 LBX1P52954 281 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 OR10A3P58181 314 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 TLE3Q04726 772 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PGGHGQ32M88 737 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 OR4F3Q6IEY1 312 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 NHLRC1Q6VVB1 395 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 CD163Q86VB7 1156 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 FSTL5Q8N475 847 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 DNASE1L2Q92874 299 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RTP4Q96DX8 246 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 ZNF75AQ96N20 296 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 ABHD14AQ9BUJ0 271 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 WDR18Q9BV38 432 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 TEX101Q9BY14 249 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RTN4RQ9BZR6 473 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SLC25A19Q9HC21 320 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GALPQ9UBC7 116 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 CLN8Q9UBY8 286 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 FZD1Q9UP38 647 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SCN4AP35499 1836 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 A0A1B0GUS0 222 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RBFOX2O43251 390 aaKnown RBP eCLIP8.5□□□□□ -1.05
CDH1-205ENST00000562836 UTS2O95399 124 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 TRGC1P0CF51 173 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PET100P0DJ07 73 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 CEBPBP17676 345 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 IDSP22304 550 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 NME2P22392 152 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RPS20P60866 119 aaKnown RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 PSMA6P60900 246 aaKnown RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 MAMLD1Q13495 774 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 MAD2L1BPQ15013 274 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 RIMKLAQ8IXN7 391 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 HAVCR2Q8TDQ0 301 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RNF133Q8WVZ7 376 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SMPDL3BQ92485 455 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PPP1R14AQ96A00 147 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GPR20Q99678 358 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 FTHL17Q9BXU8 183 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 STRADBQ9C0K7 418 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GPATCH2LQ9NWQ4 482 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 TMED3Q9Y3Q3 217 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 HSPB2A8KAH6 182 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SMIM22K7EJ46 135 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PRSS23O95084 383 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 TRGC2P03986 189 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GEMP55040 296 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PLP1P60201 277 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 ZNF543Q08ER8 600 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 HSPB2Q16082 182 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 GABRA6Q16445 453 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 METRNLQ641Q3 311 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 C8orf82Q6P1X6 216 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 GTPBP8Q8N3Z3 284 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 DBF4BQ8NFT6 615 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 HMGCLL1Q8TB92 370 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 TFGQ92734 400 aaPredicted RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 PIGTQ969N2 578 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 PTX4Q96A99 478 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SIGMAR1Q99720 223 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 CIPCQ9C0C6 399 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 RPS6KB2Q9UBS0 482 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 WDR45Q9Y484 360 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 SNX10Q9Y5X0 201 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 FLVCR1Q9Y5Y0 555 aa8.5□□□□□ -1.05
CDH1-205ENST00000562836 ZFC3H1O60293 1989 aaKnown RBP8.5□□□□□ -1.05
CDH1-205ENST00000562836 BAZ2BQ9UIF8 2168 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 WIPF1O43516 503 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 OR12D1P0DN82 309 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 B4GALT1P15291 398 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 MGMTP16455 207 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 ADRA2CP18825 462 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SDC2P34741 201 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CFHR2P36980 270 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 RAB1AP62820 205 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 EGR4Q05215 589 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 DUSP2Q05923 314 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 MRPL23Q16540 153 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 C4orf17Q53FE4 359 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CST9Q5W186 159 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 NIT1Q86X76 327 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 EID2Q8N6I1 236 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SLC7A13Q8TCU3 470 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SLC25A46Q96AG3 418 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 RNF157Q96PX1 679 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 LYSMD1Q96S90 227 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 OMDQ99983 421 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 SOSTQ9BQB4 213 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 CLMPQ9H6B4 373 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 MRPL15Q9P015 296 aaKnown RBP8.49□□□□□ -1.05
CDH1-205ENST00000562836 TIMM10BQ9Y5J6 103 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 HCFC2Q9Y5Z7 792 aa8.49□□□□□ -1.05
CDH1-205ENST00000562836 UBIAD1Q9Y5Z9 338 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms