RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 LRRC28Q86X40 367 aaPredicted RBP16.34■□□□□ 0.21
CDH11-203ENST00000562325 NPEPL1Q8NDH3 523 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 TLCD1Q96CP7 247 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 C1orf147Q96MC9 270 aaPredicted RBP16.34■□□□□ 0.21
CDH11-203ENST00000562325 OR2H1Q9GZK4 316 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 KAT8Q9H7Z6 458 aaKnown RBP16.34■□□□□ 0.21
CDH11-203ENST00000562325 MAN2C1Q9NTJ4 1040 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 ZNF69Q9UC07 566 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 TGP01266 2768 aa16.34■□□□□ 0.21
CDH11-203ENST00000562325 F5H0A9 414 aaPredicted RBP16.33■□□□□ 0.2
CDH11-203ENST00000562325 IFNL4K9M1U5 179 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 OPN1SWP03999 348 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 THRBP10828 461 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 GSTM3P21266 225 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 GUCA1AP43080 201 aaPredicted RBP16.33■□□□□ 0.2
CDH11-203ENST00000562325 AGKQ53H12 422 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 KLF17Q5JT82 389 aaPredicted RBP16.33■□□□□ 0.2
CDH11-203ENST00000562325 FAM205BPQ63HN1 556 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 FOXL2NBQ6ZUU3 175 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 CCDC80Q76M96 950 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 RBM45Q8IUH3 476 aaKnown RBP16.33■□□□□ 0.2
CDH11-203ENST00000562325 ABHD4Q8TB40 342 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 SLC26A7Q8TE54 656 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 TSPEARQ8WU66 669 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 SGTBQ96EQ0 304 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 CGREF1Q99674 301 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 TXNIPQ9H3M7 391 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 NANOGQ9H9S0 305 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 NPHS2Q9NP85 383 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 MMP26Q9NRE1 261 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 TBCCD1Q9NVR7 557 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 NDRG4Q9ULP0 352 aaKnown RBP16.33■□□□□ 0.2
CDH11-203ENST00000562325 MMP24Q9Y5R2 645 aa16.33■□□□□ 0.2
CDH11-203ENST00000562325 A0A1B0GUS0 222 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 ARHGAP32A7KAX9 2087 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 TRAPPC2LH3BP13 241 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 SURF4O15260 269 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 SLC2A10O95528 541 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 SBK2P0C263 348 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 COX5BP10606 129 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 CDAP32320 146 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 AQP2P41181 271 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 BTG1P62324 171 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 ESCO2Q56NI9 601 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 SLC25A47Q6Q0C1 308 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 DHDDSQ86SQ9 333 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 MUC20Q8N307 709 aaPredicted RBP16.32■□□□□ 0.2
CDH11-203ENST00000562325 AKR7LQ8NHP1 331 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 VANGL1Q8TAA9 524 aaPredicted RBP16.32■□□□□ 0.2
CDH11-203ENST00000562325 GEMIN6Q8WXD5 167 aaKnown RBP16.32■□□□□ 0.2
CDH11-203ENST00000562325 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 C4orf45Q96LM5 186 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 COG8Q96MW5 612 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 RBP7Q96R05 134 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 WNT5BQ9H1J7 359 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 OR5V1Q9UGF6 321 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.32■□□□□ 0.2
CDH11-203ENST00000562325 IL19Q9UHD0 177 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 LRCH1Q9Y2L9 728 aa16.32■□□□□ 0.2
CDH11-203ENST00000562325 V9GYY5 206 aaPredicted RBP16.32■□□□□ 0.2
CDH11-203ENST00000562325 TIMM8AO60220 97 aaPredicted RBP16.31■□□□□ 0.2
CDH11-203ENST00000562325 OR5F1O95221 314 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 FSTL3O95633 263 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 KITLGP21583 273 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 MDH2P40926 338 aaKnown RBP16.31■□□□□ 0.2
CDH11-203ENST00000562325 DEFA6Q01524 100 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 PAX8Q06710 450 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 CD47Q08722 323 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 PSG7Q13046 419 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 SGCAQ16586 387 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 LEG1Q6P5S2 330 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 TMEM239Q8WW34 195 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 HDAC2Q92769 488 aaKnown RBP16.31■□□□□ 0.2
CDH11-203ENST00000562325 EBF4Q9BQW3 602 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 MS4A7Q9GZW8 240 aaPredicted RBP16.31■□□□□ 0.2
CDH11-203ENST00000562325 MSL2Q9HCI7 577 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 EGFL7Q9UHF1 273 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 HIF3AQ9Y2N7 669 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 NDUFAF1Q9Y375 327 aa16.31■□□□□ 0.2
CDH11-203ENST00000562325 C12orf71A8MTZ7 269 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 J3QW42 95 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 NGFP01138 241 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 ERVK-25P63136 954 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 THOC1Q96FV9 657 aaKnown RBP16.3■□□□□ 0.2
CDH11-203ENST00000562325 ZNF48Q96MX3 618 aaPredicted RBP16.3■□□□□ 0.2
CDH11-203ENST00000562325 BAG5Q9UL15 447 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 MED31Q9Y3C7 131 aa16.3■□□□□ 0.2
CDH11-203ENST00000562325 IGKV1D-43A0A0B4J1Z2 117 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 ANGPT2O15123 496 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 MSR1P21757 451 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 LAP3P28838 519 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 MTPNP58546 118 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 TAS2R41P59536 307 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 FMODQ06828 376 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 ZMYND11Q15326 602 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 SLC9A3R2Q15599 337 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 ANKDD1AQ495B1 522 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 ALG10Q5BKT4 473 aa16.29■□□□□ 0.2
CDH11-203ENST00000562325 ZNF362Q5T0B9 420 aaPredicted RBP16.29■□□□□ 0.2
CDH11-203ENST00000562325 LRRN1Q6UXK5 716 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms