RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 C1QTNF9BB2RNN3 333 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 E9PI62 339 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 GPX5O75715 221 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RGS9O75916 674 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 SERPINA3P01011 423 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 C1QTNF9P0C862 333 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 PSKH1P11801 424 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 EDNRAP25101 427 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 FGF9P31371 208 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 CRYBB2P43320 205 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RIDAP52758 137 aaKnown RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 NCS1P62166 190 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 LSM3P62310 102 aaKnown RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RPS25P62851 125 aaKnown RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 SPCS2Q15005 226 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 NRN1LQ496H8 165 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 PHYHD1Q5SRE7 291 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 FDX2Q6P4F2 183 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RHOUQ7L0Q8 258 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 DCXRQ7Z4W1 244 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 TUSC5Q8IXB3 177 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 MS4A15Q8N5U1 240 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 ST7LQ8TDW4 575 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RNF133Q8WVZ7 376 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 APH1AQ96BI3 265 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 GMPPAQ96IJ6 420 aaPredicted RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
COMMD4-205ENST00000562310 KCNN2Q9H2S1 579 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 SIAEQ9HAT2 523 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 GSTK1Q9Y2Q3 226 aa12.62□□□□□ -0.39
COMMD4-205ENST00000562310 A0A1B0GTH9 108 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 SS18L1O75177 396 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 UPK3AO75631 287 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 KRT33AO76009 404 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 AGTR1P30556 359 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 PTGER4P35408 488 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 RPS27P42677 84 aaKnown RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 GDI2P50395 445 aaKnown RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ST3GAL2Q16842 350 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 LIPNQ5VXI9 398 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ABHD12BQ7Z5M8 362 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 LINC00346Q8IVM7 164 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 WNT2BQ93097 391 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 NABP1Q96AH0 204 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF775Q96BV0 537 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ALKBH3Q96Q83 286 aaPredicted RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 AMELYQ99218 206 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 WACQ9BTA9 647 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 DCUN1D5Q9BTE7 237 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 CENPOQ9BU64 300 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 TMED9Q9BVK6 235 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 DCSTAMPQ9H295 470 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 NIPAL2Q9H841 368 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 CALHM2Q9HA72 323 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ELOVL3Q9HB03 270 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 CRLF2Q9HC73 371 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 GPR35Q9HC97 309 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 EMC7Q9NPA0 242 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 TMEM38BQ9NVV0 291 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 SLCO1C1Q9NYB5 712 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 RALYQ9UKM9 306 aaKnown RBP12.61□□□□□ -0.39
COMMD4-205ENST00000562310 GRIP1Q9Y3R0 1128 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 LHFPL6Q9Y693 200 aa12.61□□□□□ -0.39
COMMD4-205ENST00000562310 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ARPC4-TTLL3A0A0A6YYG9 625 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TRBV2A0A0J9YWF9 115 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF878C9JN71 531 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF587BE7ETH6 402 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 MAGEB4O15481 346 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TGM6O95932 706 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 GABRA1P14867 456 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 PCSK6P29122 969 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 CDAP32320 146 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 DCTDP32321 178 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 NTF4P34130 210 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 SERPINB10P48595 397 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ROR2Q01974 943 aaKnown RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 SLC3A1Q07837 685 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ALKBH1Q13686 389 aaKnown RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 SGCAQ16586 387 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF829Q3KNS6 432 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ACSF3Q4G176 576 aaPredicted RBP12.6□□□□□ -0.39
COMMD4-205ENST00000562310 FAM27BQ5VT28 67 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 PAMR1Q6UXH9 720 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 LRRN1Q6UXK5 716 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 ZNF100Q8IYN0 542 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 THRSPQ92748 146 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TMEM203Q969S6 136 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 SLAMF6Q96DU3 332 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 PGLYRP3Q96LB9 341 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 KCTD7Q96MP8 289 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TRIB1Q96RU8 372 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
COMMD4-205ENST00000562310 TXNL4BQ9NX01 149 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms