RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SF3A3Q12874 501 aaKnown RBP eCLIP7.23□□□□□ -1.25
PALB2-202ENST00000561514 CCNIQ14094 377 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 DAG1Q14118 895 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 MFSD13AQ14CX5 517 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CARTPTQ16568 116 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CEACAM16Q2WEN9 425 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 GTDC1Q4AE62 458 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 RUNDC3AQ59EK9 446 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 FAM76BQ5HYJ3 339 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 RPS26P11Q5JNZ5 115 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 ELFN2Q5R3F8 820 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 H1FNTQ75WM6 255 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 C20orf196Q8IYI0 205 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 BBS10Q8TAM1 723 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF417Q8TAU3 575 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 UBASH3BQ8TF42 649 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 GTF2H4Q92759 462 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 TAAR8Q969N4 342 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 MRPL24Q96A35 216 aaKnown RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF587Q96SQ5 575 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 DCUN1D5Q9BTE7 237 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 WDR55Q9H6Y2 383 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 CRLF2Q9HC73 371 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF224Q9NZL3 707 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 CCDC59Q9P031 241 aaKnown RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 ZNF229Q9UJW7 825 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 DIMT1Q9UNQ2 313 aaKnown RBP7.23□□□□□ -1.25
PALB2-202ENST00000561514 CORINQ9Y5Q5 1042 aa7.23□□□□□ -1.25
PALB2-202ENST00000561514 TRAV36DV7A0A075B6V5 113 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 A0A1B0GWA3 101 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 VSTM5A8MXK1 200 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 B4DSR2 109 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SYNGR3O43761 229 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SSX5O60225 188 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 RP2O75695 350 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 HPRP00739 348 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 TFP02787 698 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 RAB3AP20336 220 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 ERP29P30040 261 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 GRPRP30550 384 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 GLRXP35754 106 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 CRATP43155 626 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 RPS5P46782 204 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 ARHGDIBP52566 201 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 PPP5CP53041 499 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SNTB2Q13425 540 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 RGNQ15493 299 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SLC9B1Q4ZJI4 515 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 YIF1BQ5BJH7 314 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 ZNF311Q5JNZ3 666 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 PHYHD1Q5SRE7 291 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 LRIF1Q5T3J3 769 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 VHLLQ6RSH7 139 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 C16orf89Q6UX73 402 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 MAVSQ7Z434 540 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 COMTD1Q86VU5 262 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 ZCCHC24Q8N2G6 241 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 KDM8Q8N371 416 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 GPR137CQ8N3F9 429 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 POU5F2Q8N7G0 328 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 ZNF680Q8NEM1 530 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 OR5T2Q8NGG2 359 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 OR5H6Q8NGV6 325 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 VANGL1Q8TAA9 524 aaPredicted RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 DNAJA4Q8WW22 397 aaPredicted RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 PYDC1Q8WXC3 89 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 STON2Q8WXE9 905 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SLC38A4Q969I6 547 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 SLC47A1Q96FL8 570 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 ITCHQ96J02 903 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 WACQ9BTA9 647 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 C9orf16Q9BUW7 83 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 MRPL37Q9BZE1 423 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 EIF3KQ9UBQ5 218 aaKnown RBP7.22□□□□□ -1.25
PALB2-202ENST00000561514 EXTL2Q9UBQ6 330 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 RIMS3Q9UJD0 308 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 POMPQ9Y244 141 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 PRELID3BQ9Y3B1 194 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 CMAHPQ9Y471 501 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 A3GALT2U3KPV4 340 aa7.22□□□□□ -1.25
PALB2-202ENST00000561514 A0A087WUJ7 227 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 TRBV5-3A0A0A0MS03 114 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 A0A0B4J2E0 115 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 A0A1B0GX12 115 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 A0A1W2PPW3 197 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 ZNF98A6NK75 572 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 MS4A18H0YCH9 400 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 M0R233 179 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 PTP4A3O75365 173 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 SNAP29O95721 258 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 HLA-HP01893 362 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 BGLAPP02818 100 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 ADRA2AP08913 450 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 ARAFP10398 606 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 IFNGR1P15260 489 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 ACHEP22303 614 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 MYF6P23409 242 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 VAMP1P23763 118 aa7.21□□□□□ -1.26
PALB2-202ENST00000561514 GTF2E2P29084 291 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms