RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 NABP1Q96AH0 204 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 NMD3Q96D46 503 aaKnown RBP8.75□□□□□ -1.01
HERC1-212ENST00000561348 FEVQ99581 238 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 CDADC1Q9BWV3 514 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 PLA2G12AQ9BZM1 189 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 TPK1Q9H3S4 243 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 ZNF556Q9HAH1 456 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 POLE4Q9NR33 117 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 EIF3KQ9UBQ5 218 aaKnown RBP8.75□□□□□ -1.01
HERC1-212ENST00000561348 FBXL3Q9UKT7 428 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 TIMM10BQ9Y5J6 103 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 CDH10Q9Y6N8 788 aa8.75□□□□□ -1.01
HERC1-212ENST00000561348 MED13LQ71F56 2210 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 B9A039 149 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 OVOL3O00110 214 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 DCTN6O00399 190 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 EBAG9O00559 213 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 DOK2O60496 412 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 ADRA2AP08913 450 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 CST2P09228 141 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 GSTM3P21266 225 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 CRABP1P29762 137 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 PYCR1P32322 319 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 HTR5AP47898 357 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 HMGA2P52926 109 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 SELENOVP59797 346 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 ERVS71-1P61550 626 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 PSG4Q00888 419 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 GLO1Q04760 184 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 MAD2L1BPQ15013 274 aaPredicted RBP8.74□□□□□ -1.01
HERC1-212ENST00000561348 NKPD1Q17RQ9 610 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 C3orf36Q3SXR2 165 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 SLC36A3Q495N2 470 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 RGS7BPQ6MZT1 257 aaPredicted RBP8.74□□□□□ -1.01
HERC1-212ENST00000561348 RPL13AP3Q6NVV1 102 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 DPPA2Q7Z7J5 298 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 TMEM179BQ7Z7N9 219 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 DTX2Q86UW9 622 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 CIARTQ8N365 385 aaPredicted RBP8.74□□□□□ -1.01
HERC1-212ENST00000561348 IQCF1Q8N6M8 205 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 PROKR2Q8NFJ6 384 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 OR8D4Q8NGM9 314 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 OR9Q1Q8NGQ5 310 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 C11orf40Q8WZ69 217 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 SMR3AQ99954 134 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 NIPSNAP1Q9BPW8 284 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 BDH2Q9BUT1 245 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 OR2H1Q9GZK4 316 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 ZNF701Q9NV72 531 aaPredicted RBP8.74□□□□□ -1.01
HERC1-212ENST00000561348 PLEK2Q9NYT0 353 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 ASH2LQ9UBL3 628 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 GRIP1Q9Y3R0 1128 aa8.74□□□□□ -1.01
HERC1-212ENST00000561348 TEP1Q99973 2627 aaKnown RBP8.74□□□□□ -1.01
HERC1-212ENST00000561348 TCRBV3S1A0A5B6 114 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 OR6C68A6NDL8 312 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 TVP23AA6NH52 213 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 RNF223E7ERA6 249 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 SGCEO43556 437 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 MGRN1O60291 552 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 GYPBP06028 91 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ERCC1P07992 297 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 MMP7P09237 267 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 ZNF35P13682 527 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ZNF823P16415 610 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 RAD52P43351 418 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ALDH3B1P43353 468 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ZNF133P52736 654 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 RPS23P62266 143 aaKnown RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 SCRN3Q0VDG4 424 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 TNK1Q13470 666 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ENDOGQ14249 297 aaKnown RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 NRN1LQ496H8 165 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 C11orf71Q6IPW1 123 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 CORO6Q6QEF8 472 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 CLEC2AQ6UVW9 174 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 RASSF6Q6ZTQ3 369 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 AMIGO2Q86SJ2 522 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 LRP11Q86VZ4 500 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 KRTAP1-3Q8IUG1 177 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 LINC00346Q8IVM7 164 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 OR6V1Q8N148 313 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ZNF525Q8N782 197 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 NUP37Q8NFH4 326 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 OR6K6Q8NGW6 343 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 OR2AJ1Q8NGZ0 328 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ABHD4Q8TB40 342 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 SLC7A6Q92536 515 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 C18orf12Q96KH6 178 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 ZNF75AQ96N20 296 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 GPX7Q96SL4 187 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 RHNO1Q9BSD3 238 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 MRPL37Q9BZE1 423 aaKnown RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 WNT5BQ9H1J7 359 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 C1orf198Q9H425 327 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 GSX1Q9H4S2 264 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 BARX1Q9HBU1 254 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 VSX1Q9NZR4 365 aaPredicted RBP8.73□□□□□ -1.01
HERC1-212ENST00000561348 DNAJB9Q9UBS3 223 aa8.73□□□□□ -1.01
HERC1-212ENST00000561348 B9D1Q9UPM9 204 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms