RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TRIM64A6NGJ6 449 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 TRIM64BA6NI03 449 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 TFP02787 698 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 FAM157BP0CG42 384 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 NOS3P29474 1203 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 PYCR1P32322 319 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 SERPINF1P36955 418 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 WNT5AP41221 380 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 KCNMB1Q16558 191 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 SLC36A3Q495N2 470 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 ACSM5Q6NUN0 579 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.97□□□□□ -0.49
TPM1-230ENST00000561266 ZBTB46Q86UZ6 589 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 LNX2Q8N448 690 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 SLC37A3Q8NCC5 494 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 IL17RDQ8NFM7 739 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 SLC7A6Q92536 515 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 Q96MF0 132 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 DOK1Q99704 481 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 MRPL37Q9BZE1 423 aaKnown RBP11.97□□□□□ -0.49
TPM1-230ENST00000561266 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 ZNF442Q9H7R0 627 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 MOV10Q9HCE1 1003 aaKnown RBP11.97□□□□□ -0.49
TPM1-230ENST00000561266 CCNB1IP1Q9NPC3 277 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 TBC1D23Q9NUY8 699 aa11.97□□□□□ -0.49
TPM1-230ENST00000561266 YLPM1P49750 1951 aaKnown RBP11.97□□□□□ -0.49
TPM1-230ENST00000561266 ARRDC5A6NEK1 342 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 IDH3BO43837 385 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 CLUP10909 449 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 NR2C1P13056 603 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 DAPP51397 102 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 HSF2Q03933 536 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 KPNB1Q14974 876 aaKnown RBP11.96□□□□□ -0.49
TPM1-230ENST00000561266 CCDC92Q53HC0 331 aaPredicted RBP11.96□□□□□ -0.49
TPM1-230ENST00000561266 SHEQ5VZ18 495 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 CORO6Q6QEF8 472 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 DNM1P46Q6ZS02 220 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 DPPA2Q7Z7J5 298 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 GLB1L2Q8IW92 636 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 ZNF101Q8IZC7 436 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 SVOPLQ8N434 492 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 OR51L1Q8NGJ5 315 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 OR9Q1Q8NGQ5 310 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 LRTOMTQ8WZ04 291 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 SNX18Q96RF0 628 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 PLK3Q9H4B4 646 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 FAIMQ9NVQ4 179 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 MRPL22Q9NWU5 206 aaKnown RBP11.96□□□□□ -0.49
TPM1-230ENST00000561266 LHFPL6Q9Y693 200 aa11.96□□□□□ -0.49
TPM1-230ENST00000561266 ZANQ9Y493 2812 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RER1O15258 196 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 MITFO75030 526 aaPredicted RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 TMCC2O75069 709 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 E2F6O75461 281 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 CLPTM1O96005 669 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RENP00797 406 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 NGFP01138 241 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 GYPBP06028 91 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 GSTM3P21266 225 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 CCNOP22674 350 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 STOMP27105 288 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 GLRXP35754 106 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RPS27P42677 84 aaKnown RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 CENPAP49450 140 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 CRMP1Q14194 572 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 GK3PQ14409 553 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 EFNB3Q15768 340 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 ATP6AP1Q15904 470 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RSPO1Q2MKA7 263 aaPredicted RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 SHQ1Q6PI26 577 aaKnown RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 PRSS57Q6UWY2 283 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 VASH1Q7L8A9 365 aaPredicted RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 SLC26A10Q8NG04 563 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 OR52L1Q8NGH7 329 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 MRPL24Q96A35 216 aaKnown RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 SORCS2Q96PQ0 1159 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 SMR3AQ99954 134 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 SYT3Q9BQG1 590 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RBM4Q9BWF3 364 aaKnown RBP11.95□□□□□ -0.5
TPM1-230ENST00000561266 NMNAT2Q9BZQ4 307 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 POFUT1Q9H488 388 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 MED20Q9H944 212 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 ASH2LQ9UBL3 628 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 AP4S1Q9Y587 144 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 TIMM10BQ9Y5J6 103 aa11.95□□□□□ -0.5
TPM1-230ENST00000561266 IQCMA0A1B0GVH7 501 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 C5orf49A4QMS7 147 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 TVP23AA6NH52 213 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 FAM183AA6NL82 134 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 C12orf71A8MTZ7 269 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 H3BNX3 289 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 H7C417 338 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 EBAG9O00559 213 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 SYNGR3O43761 229 aa11.94□□□□□ -0.5
TPM1-230ENST00000561266 ENTPD5O75356 428 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms