RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MCTS1Q9ULC4 181 aaKnown RBP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 PCDHGA9Q9Y5G4 932 aaKnown RBP15.18■□□□□ 0.02
HDDC3-206ENST00000561036 FREM3P0C091 2139 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 TRGV5A0A0B4J1U4 118 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 OR4C45A6NMZ5 311 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF879B4DU55 563 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 TAF4O00268 1085 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 DHHO43323 396 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ZFPL1O95159 310 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 UCHL1P09936 223 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 CPN1P15169 458 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 CALRP27797 417 aaKnown RBP15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF84P51523 738 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 MXD1Q05195 221 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 RIPPLY2Q5TAB7 128 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 AAED1Q7RTV5 226 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 MFSD4AQ8N468 514 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ZADH2Q8N4Q0 377 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF845Q96IR2 970 aaPredicted RBP15.17■□□□□ 0.02
HDDC3-206ENST00000561036 PDCD1LG2Q9BQ51 273 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 TPK1Q9H3S4 243 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 SMURF1Q9HCE7 757 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 B3GAT2Q9NPZ5 323 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 EMC3Q9P0I2 261 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 PLEKHB1Q9UF11 243 aaPredicted RBP15.17■□□□□ 0.02
HDDC3-206ENST00000561036 WASF3Q9UPY6 502 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 ALPK2Q86TB3 2170 aa15.17■□□□□ 0.02
HDDC3-206ENST00000561036 IGHG3P01860 377 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 CLEC2LP0C7M8 214 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 BMP4P12644 408 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 MAPK3P27361 379 aaPredicted RBP15.16■□□□□ 0.02
HDDC3-206ENST00000561036 ETV6P41212 452 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 SELENOPP49908 381 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 INSL4Q14641 139 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 RNFT1Q5M7Z0 435 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 OR2AJ1Q8NGZ0 328 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 SCNM1Q9BWG6 230 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 ULBP2Q9BZM5 246 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 NELFAQ9H3P2 528 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 LDAHQ9H6V9 325 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 NIPAL2Q9H841 368 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 MSRB2Q9Y3D2 182 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 LRP12Q9Y561 859 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 LHFPL6Q9Y693 200 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 R4GMQ9 66 aa15.16■□□□□ 0.02
HDDC3-206ENST00000561036 TRBV5-5A0A0J9YX44 114 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 OR6C65A6NJZ3 312 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF724A8MTY0 619 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 DLL1O00548 723 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 TFECO14948 347 aaPredicted RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 H2BFMP0C1H6 154 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 MSR1P21757 451 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 MRPS34P82930 218 aaKnown RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF45Q02386 682 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 SRYQ05066 204 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 RNPS1Q15287 305 aaKnown RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 STK11Q15831 433 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 INAQ16352 499 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 PHYHD1Q5SRE7 291 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 OTPQ5XKR4 325 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 CATSPERDQ86XM0 798 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 LINC00346Q8IVM7 164 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 GPR137CQ8N3F9 429 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 PRSS35Q8N3Z0 413 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 ZNF676Q8N7Q3 588 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 CPT1CQ8TCG5 803 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 ACOT12Q8WYK0 555 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 HSD17B8Q92506 261 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 SLAMF6Q96DU3 332 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 WDFY2Q96P53 400 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 KCNS3Q9BQ31 491 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 DEFB127Q9H1M4 99 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 PPIL3Q9H2H8 161 aaKnown RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 EXO5Q9H790 373 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 PARPBPQ9NWS1 579 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 GDF2Q9UK05 429 aaPredicted RBP15.15■□□□□ 0.02
HDDC3-206ENST00000561036 B3GNT3Q9Y2A9 372 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 POLR1DQ9Y2S0 133 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 CSAG2Q9Y5P2 127 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 CEP250Q9BV73 2442 aa15.15■□□□□ 0.02
HDDC3-206ENST00000561036 MED12Q93074 2177 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 SHISA3A0PJX4 238 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 TMEM127O75204 238 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 SRSF10O75494 262 aaKnown RBP15.14■□□□□ 0.01
HDDC3-206ENST00000561036 RAF1P04049 648 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 ITGB2P05107 769 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 ZNF24P17028 368 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 NPR2P20594 1047 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 CDAP32320 146 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 KIR3DL2P43630 455 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 Q499Y3 187 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 HSD17B12Q53GQ0 312 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 WDR38Q5JTN6 314 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 OR7E24Q6IFN5 339 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 CHMP1BQ7LBR1 199 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 OR13C5Q8NGS8 318 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 GPR148Q8TDV2 347 aa15.14■□□□□ 0.01
HDDC3-206ENST00000561036 RGP1Q92546 391 aaPredicted RBP15.14■□□□□ 0.01
HDDC3-206ENST00000561036 KCTD12Q96CX2 325 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms