RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 GMPPBQ9Y5P6 360 aa10.54□□□□□ -0.72
IRF9-211ENST00000560852 ANKHD1Q8IWZ3 2542 aaKnown RBP10.53□□□□□ -0.72
IRF9-211ENST00000560852 IGHV1-18A0A0C4DH31 117 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 CCDC182A6NF36 153 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 FAM183AA6NL82 134 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 TMCC2O75069 709 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 HLA-HP01893 362 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 CLUP10909 449 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZNF35P13682 527 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 CD40P25942 277 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 SSTR2P30874 369 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 HTR1FP30939 366 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 CAPGP40121 348 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 PSG4Q00888 419 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 SCRN3Q0VDG4 424 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 SGCAQ16586 387 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZIK1Q3SY52 487 aaPredicted RBP10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZNF691Q5VV52 312 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 SLC18B1Q6NT16 456 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 TMEM53Q6P2H8 277 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 UGT2A3Q6UWM9 527 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 MDP1Q86V88 176 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZNF584Q8IVC4 421 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ALDH16A1Q8IZ83 802 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZNF454Q8N9F8 522 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ZNF555Q8NEP9 628 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 PROKR2Q8NFJ6 384 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 OR9Q1Q8NGQ5 310 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 RFKQ969G6 155 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 ADI1Q9BV57 179 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 OR2H1Q9GZK4 316 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 NOX3Q9HBY0 568 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 LHFPL6Q9Y693 200 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 COMMD3-BMI1R4GMX3 469 aa10.53□□□□□ -0.72
IRF9-211ENST00000560852 SPTAN1Q13813 2472 aaKnown RBP10.52□□□□□ -0.72
IRF9-211ENST00000560852 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 A0A1W2PPL8 197 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 OR6C6A6NF89 314 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 J3QW42 95 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 MPZL1O95297 269 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 ZNF32P17041 273 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 TUBG1P23258 451 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 PCSK6P29122 969 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 GSTT1P30711 240 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 OTX1P32242 354 aaPredicted RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 PYCR1P32322 319 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 HSPA13P48723 471 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 ENTPD1P49961 510 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 NAAAQ02083 359 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 POU4F2Q12837 409 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 ECH1Q13011 328 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 LCN1P1Q5VSP4 162 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 DEGS2Q6QHC5 323 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 SHFQ7M4L6 423 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 ENTHD1Q8IYW4 607 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 SETD9Q8NE22 299 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 FAM81AQ8TBF8 368 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 UBE2FQ969M7 185 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 POM121L2Q96KW2 1035 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 Q96MT0 163 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 ZNF582Q96NG8 517 aaPredicted RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 DCLRE1CQ96SD1 692 aaKnown RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 YIPF3Q9GZM5 350 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 WNT5BQ9H1J7 359 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 PNRC2Q9NPJ4 139 aaKnown RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 TUBG2Q9NRH3 451 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 DDX28Q9NUL7 540 aaKnown RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 IMPAD1Q9NX62 359 aa10.52□□□□□ -0.73
IRF9-211ENST00000560852 H2AFY2Q9P0M6 372 aaPredicted RBP10.52□□□□□ -0.73
IRF9-211ENST00000560852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.52□□□□□ -0.73
IRF9-211ENST00000560852 ICE1Q9Y2F5 2266 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 SNTNA6NMZ2 147 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 J3QRE1 110 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 ZNF593O00488 134 aaPredicted RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 SYNGR3O43761 229 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 SEC14L2O76054 403 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 RAB36O95755 333 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 GYPBP06028 91 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 CECR9P0C854 216 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 ZNF823P16415 610 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 ALOX5APP20292 161 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 VHLP40337 213 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 NUDT6P53370 316 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 TLE4Q04727 773 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 PLP2Q04941 152 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 APOFQ13790 326 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 MAD2L1BPQ15013 274 aaPredicted RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 RSPO1Q2MKA7 263 aaPredicted RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 CCDC92Q53HC0 331 aaPredicted RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 PABPC1L2AQ5JQF8 200 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 VASH1Q7L8A9 365 aaPredicted RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 SLC16A9Q7RTY1 509 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 WFDC8Q8IUA0 241 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 LRRC18Q8N456 261 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 ZNF511Q8NB15 262 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 CPEB3Q8NE35 698 aaKnown RBP10.51□□□□□ -0.73
IRF9-211ENST00000560852 NUP37Q8NFH4 326 aa10.51□□□□□ -0.73
IRF9-211ENST00000560852 BBS1Q8NFJ9 593 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms