RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 M0R1B8 84 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 MBTPS2O43462 519 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CBR3O75828 277 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 GK2Q14410 553 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-208ENST00000560371 NAXDQ8IW45 347 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 DND1Q8IYX4 353 aaKnown RBP12.3□□□□□ -0.44
TRAF3-208ENST00000560371 MED6O75586 246 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 PNLIPRP2P54317 469 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 AKR1C1Q04828 323 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 SPRED3Q2MJR0 410 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 C9orf152Q5JTZ5 239 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 GUSBP11Q6P575 273 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CCDC28AQ8IWP9 274 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 DEDD2Q8WXF8 326 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ASIC5Q9NY37 505 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 YBX2Q9Y2T7 364 aaKnown RBP12.3□□□□□ -0.44
TRAF3-208ENST00000560371 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ETV7Q9Y603 341 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 TGM1P22735 817 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ETV6P41212 452 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 GNB2P62879 340 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CST9LP1Q5W188 147 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ISL2Q96A47 359 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 OR11A1Q9GZK7 315 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 SLC22A11Q9NSA0 550 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CLDN1O95832 211 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 UBBP0CG47 229 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 ARL16Q0P5N6 197 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 CMPK2Q5EBM0 449 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 DEFB124Q8NES8 71 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 OR51A2Q8NGJ7 313 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 NRG4Q8WWG1 115 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 FBXO4Q9UKT5 387 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 GPR55Q9Y2T6 319 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-208ENST00000560371 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 HTR2BP41595 481 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 SRPXP78539 464 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-208ENST00000560371 TFF2Q03403 129 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 XKR7Q5GH72 579 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 OR10J5Q8NHC4 309 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 C17orf50Q8WW18 174 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 PHYHIPQ92561 330 aa12.3□□□□□ -0.44
TRAF3-208ENST00000560371 BCKDHBP21953 392 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 OMGP23515 440 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SDHAP31040 664 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 C19orf43Q9BQ61 176 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SLC22A20A6NK97 555 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 NPBWR1P48145 328 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 BRICD5Q6PL45 260 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 OR56B4Q8NH76 319 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 TXNL4BQ9NX01 149 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 LOC100289279A0A1B0GTE1 492 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 CLDN24A6NM45 220 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 E9PI62 339 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 MAVSQ7Z434 540 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SHARPINQ9H0F6 387 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 PRELID1Q9Y255 219 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 B3GALT5Q9Y2C3 310 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 ADAMTSL1Q8N6G6 1762 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 A0A087WZY1 265 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 K7EPK0 472 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 RPS25P62851 125 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 NHSL2Q5HYW2 709 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 FCRL6Q6DN72 434 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 TCTN3Q6NUS6 607 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 CORO6Q6QEF8 472 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 RBM45Q8IUH3 476 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 FAM71E2Q8N5Q1 922 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 FAM3DQ96BQ1 224 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 MRGPRX4Q96LA9 322 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 KCNJ15Q99712 375 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SLC38A1Q9H2H9 487 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 GMPR2Q9P2T1 348 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 PCYT1BQ9Y5K3 369 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 IGHV3-15A0A0B4J1V0 119 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 CXCL13O43927 109 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 TRA2AQ13595 282 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 OTUD1Q5VV17 481 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 ENTHD1Q8IYW4 607 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 OR11G2Q8NGC1 345 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SSUH2Q9Y2M2 353 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 APOA2P02652 100 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 ANXA7P20073 488 aaKnown RBP12.29□□□□□ -0.44
TRAF3-208ENST00000560371 OR2A1Q8NGT9 310 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 TPPP3Q9BW30 176 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 PLA2G2FQ9BZM2 168 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 SLCO5A1Q9H2Y9 848 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 EMC7Q9NPA0 242 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
TRAF3-208ENST00000560371 HRO43593 1189 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms