RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 GAL3ST1Q99999 423 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 OR2H1Q9GZK4 316 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 ZNF665Q9H7R5 613 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 RHCGQ9UBD6 479 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 RPS6KA6Q9UK32 745 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 PCDHB10Q9UN67 800 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 A4GNTQ9UNA3 340 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 COL6A5A8TX70 2615 aa10.74□□□□□ -0.69
SNX1-209ENST00000559961 TRAV27A0A087WT01 109 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 SURF4O15260 269 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 PIP5K1CO60331 668 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 NCR1O76036 304 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 MPZL1O95297 269 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 ABHD16AO95870 558 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 IGHMP01871 453 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 TSPAN19P0C672 248 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 COX4I1P13073 169 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 ZBED5Q49AG3 693 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 MBNL2Q5VZF2 373 aaKnown RBP10.73□□□□□ -0.69
SNX1-209ENST00000559961 MBOAT2Q6ZWT7 520 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 IGFN1Q86VF2 1251 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 POU5F2Q8N7G0 328 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 NPEPL1Q8NDH3 523 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 SLC25A40Q8TBP6 338 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 KLF14Q8TD94 323 aaPredicted RBP10.73□□□□□ -0.69
SNX1-209ENST00000559961 CMTM5Q96DZ9 223 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 POM121L2Q96KW2 1035 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 C4orf45Q96LM5 186 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 TSPAN32Q96QS1 320 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 KCTD14Q9BQ13 255 aaPredicted RBP10.73□□□□□ -0.69
SNX1-209ENST00000559961 OR2J1Q9GZK6 312 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 ANKRD19PQ9H560 264 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 RERGLQ9H628 205 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 ARMCX1Q9P291 453 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 AURKCQ9UQB9 309 aa10.73□□□□□ -0.69
SNX1-209ENST00000559961 J3QLI3 93 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 RP2O75695 350 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 SERPINA1P01009 418 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 ITGA2P17301 1181 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 TNFRSF1AP19438 455 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 MAKP20794 623 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 GATA3P23771 443 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 SRSF2Q01130 221 aaKnown RBP10.72□□□□□ -0.69
SNX1-209ENST00000559961 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 DCAF12L2Q5VW00 463 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 ZNF774Q6NX45 483 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 THSD4Q6ZMP0 1018 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 CBLL1Q75N03 491 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 VTCN1Q7Z7D3 282 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 OR5L1Q8NGL2 311 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 ZFAND2BQ8WV99 257 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 IPCEF1Q8WWN9 437 aaPredicted RBP10.72□□□□□ -0.69
SNX1-209ENST00000559961 NABP1Q96AH0 204 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 MARS2Q96GW9 593 aaKnown RBP10.72□□□□□ -0.69
SNX1-209ENST00000559961 ZNF570Q96NI8 536 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 RACGAP1Q9H0H5 632 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 MAN2C1Q9NTJ4 1040 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 CMTM6Q9NX76 183 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 POLR1DQ9Y2S0 133 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 WIPI2Q9Y4P8 454 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 UGT2A1Q9Y4X1 527 aa10.72□□□□□ -0.69
SNX1-209ENST00000559961 FBN1P35555 2871 aaKnown RBP10.72□□□□□ -0.69
SNX1-209ENST00000559961 ANK3Q12955 4377 aaKnown RBP10.72□□□□□ -0.69
SNX1-209ENST00000559961 LOC100509620A0A075B734 347 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 FAM157AC9JC47 383 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 TRIM77I1YAP6 450 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 SGCEO43556 437 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 DOK2O60496 412 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 KHDRBS3O75525 346 aaKnown RBP10.71□□□□□ -0.69
SNX1-209ENST00000559961 SASH3O75995 380 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 IGHV1-46P01743 117 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 CD14P08571 375 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 COX5BP10606 129 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 FPR2P25090 351 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 HTR5AP47898 357 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 CENPAP49450 140 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 NUDT2P50583 147 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 SLC7A2P52569 658 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 SMIM11AP58511 58 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 LMO4P61968 165 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 ACTG1P63261 375 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 TNFAIP6P98066 277 aaPredicted RBP10.71□□□□□ -0.69
SNX1-209ENST00000559961 MTX3Q5HYI7 312 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 FGD3Q5JSP0 725 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 GPR139Q6DWJ6 353 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 DNM1P34Q6PK57 102 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 RBMS3Q6XE24 437 aaKnown RBP10.71□□□□□ -0.69
SNX1-209ENST00000559961 TMPRSS11FQ6ZWK6 438 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 SLC15A3Q8IY34 581 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 KLHL36Q8N4N3 616 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 OR13C2Q8NGS9 318 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 NANPQ8TBE9 248 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 HSH2DQ96JZ2 352 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 SUCNR1Q9BXA5 334 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 WNT5BQ9H1J7 359 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 POLE4Q9NR33 117 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 UBAP1Q9NZ09 502 aa10.71□□□□□ -0.69
SNX1-209ENST00000559961 PRSS37A4D1T9 235 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 J3KTA2 159 aa10.7□□□□□ -0.7
SNX1-209ENST00000559961 PLPP2O43688 288 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms