RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ANOS1P23352 680 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MAP2K4P45985 399 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PER3P56645 1201 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SNRPGP62308 76 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 ROR2Q01974 943 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 FAPQ12884 760 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MED21Q13503 144 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SNTB1Q13884 538 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 HIST3H3Q16695 136 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 CEACAM16Q2WEN9 425 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ANKDD1AQ495B1 522 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 C6orf141Q5SZD1 244 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LINC01590Q5TEZ4 76 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 GPR139Q6DWJ6 353 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SLC25A47Q6Q0C1 308 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 CORO6Q6QEF8 472 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 KLHL24Q6TFL4 600 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 TFAP2EQ6VUC0 442 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PLEKHG7Q6ZR37 379 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 AHSA2Q719I0 299 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LUZP2Q86TE4 346 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ADCK1Q86TW2 530 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ERI1Q8IV48 349 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 LINC00346Q8IVM7 164 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 C20orf196Q8IYI0 205 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ZNF100Q8IYN0 542 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 UBE2J2Q8N2K1 259 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 FAM26EQ8N5C1 309 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 RELL2Q8NC24 303 aaPredicted RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 ST6GALNAC3Q8NDV1 305 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SETD9Q8NE22 299 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 OR52I1Q8NGK6 324 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 OR8J1Q8NGP2 316 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 FGFBP3Q8TAT2 258 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 GGHQ92820 318 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ZNF566Q969W8 418 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 TMEM45BQ96B21 275 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 STARD4Q96DR4 205 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LGALS12Q96DT0 336 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 RNFT2Q96EX2 444 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SLC25A44Q96H78 314 aaPredicted RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 GMPPAQ96IJ6 420 aaPredicted RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 AMELYQ99218 206 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ALG12Q9BV10 488 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SF3B5Q9BWJ5 86 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 ULBP2Q9BZM5 246 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 NDEL1Q9GZM8 345 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 SLCO5A1Q9H2Y9 848 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 TP63Q9H3D4 680 aaPredicted RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 Q9H521 79 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 BCO1Q9HAY6 547 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 NOX3Q9HBY0 568 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 CRLF2Q9HC73 371 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 GPR35Q9HC97 309 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MRPL22Q9NWU5 206 aaKnown RBP4.58□□□□□ -1.68
SPG11-220ENST00000559933 CLN6Q9NWW5 311 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 GLTPQ9NZD2 209 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 EMC3Q9P0I2 261 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 ENOPH1Q9UHY7 261 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 B9D1Q9UPM9 204 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 BAIAP2Q9UQB8 552 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 MYRFQ9Y2G1 1151 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LRCH1Q9Y2L9 728 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 UGT2A1Q9Y4X1 527 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 PMF1-BGLAPU3KQ54 211 aa4.58□□□□□ -1.68
SPG11-220ENST00000559933 LOC102725191A0A1B0GVB3 256 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NKX2-6A6NCS4 301 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 A6NIZ1 184 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NPIPB13A6NJU9 1138 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CD8B2A6NJW9 211 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 FAM90A27PA6NNH2 459 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ZNF724A8MTY0 619 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 EEF1E1-BLOC1S5C9J1V9 151 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 NPIPB4C9JG80 1138 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CCL21O00585 134 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 PRODHO43272 600 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 DHHO43323 396 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 EEF1E1O43324 174 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 IDH3BO43837 385 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 RAD51DO75771 328 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 LYZL6O75951 148 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 KRT33AO76009 404 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 VAMP5O95183 116 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 FADS2O95864 444 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 IL18BPO95998 194 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CGAP01215 116 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 HLA-DQA2P01906 255 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ITGA5P08648 1049 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 SPARCP09486 303 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 FCGR2AP12318 317 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 GABRA1P14867 456 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 PAICSP22234 425 aaKnown RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 IGHV1-2P23083 117 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CRHBPP24387 322 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 C21orf33P30042 268 aaPredicted RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 HTR1FP30939 366 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CEACAM8P31997 349 aaPredicted RBP4.57□□□□□ -1.68
SPG11-220ENST00000559933 CA7P43166 264 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 ETV1P50549 477 aa4.57□□□□□ -1.68
SPG11-220ENST00000559933 CHN2P52757 468 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms