RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 SGCEO43556 437 aa8.78□□□□□ -1
USP3-216ENST00000559873 PRKYO43930 277 aa8.78□□□□□ -1
USP3-216ENST00000559873 IGLV1-44P01699 117 aa8.78□□□□□ -1
USP3-216ENST00000559873 GYPBP06028 91 aa8.78□□□□□ -1
USP3-216ENST00000559873 CD40P25942 277 aa8.78□□□□□ -1
USP3-216ENST00000559873 EPHA2P29317 976 aa8.78□□□□□ -1
USP3-216ENST00000559873 PYCR1P32322 319 aa8.78□□□□□ -1
USP3-216ENST00000559873 APLNRP35414 380 aa8.78□□□□□ -1
USP3-216ENST00000559873 HSPA13P48723 471 aa8.78□□□□□ -1
USP3-216ENST00000559873 ENTPD1P49961 510 aa8.78□□□□□ -1
USP3-216ENST00000559873 GALK2Q01415 458 aa8.78□□□□□ -1
USP3-216ENST00000559873 TEKQ02763 1124 aa8.78□□□□□ -1
USP3-216ENST00000559873 PIGFQ07326 219 aa8.78□□□□□ -1
USP3-216ENST00000559873 BSPH1Q075Z2 132 aa8.78□□□□□ -1
USP3-216ENST00000559873 TMED1Q13445 227 aa8.78□□□□□ -1
USP3-216ENST00000559873 IL18R1Q13478 541 aa8.78□□□□□ -1
USP3-216ENST00000559873 TBC1D28Q2M2D7 210 aa8.78□□□□□ -1
USP3-216ENST00000559873 PABPC1L2AQ5JQF8 200 aa8.78□□□□□ -1
USP3-216ENST00000559873 NCMAPQ5T1S8 102 aa8.78□□□□□ -1
USP3-216ENST00000559873 SEZ6L2Q6UXD5 910 aa8.78□□□□□ -1
USP3-216ENST00000559873 UNQ6126/PRO20091Q6UXV3 157 aa8.78□□□□□ -1
USP3-216ENST00000559873 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
USP3-216ENST00000559873 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.78□□□□□ -1
USP3-216ENST00000559873 DHRSXQ8N5I4 330 aa8.78□□□□□ -1
USP3-216ENST00000559873 GJC3Q8NFK1 279 aa8.78□□□□□ -1
USP3-216ENST00000559873 OR1J2Q8NGS2 313 aa8.78□□□□□ -1
USP3-216ENST00000559873 CYGBQ8WWM9 190 aa8.78□□□□□ -1
USP3-216ENST00000559873 HTRA1Q92743 480 aa8.78□□□□□ -1
USP3-216ENST00000559873 Q96MT0 163 aa8.78□□□□□ -1
USP3-216ENST00000559873 FOXN4Q96NZ1 517 aa8.78□□□□□ -1
USP3-216ENST00000559873 IL4I1Q96RQ9 567 aa8.78□□□□□ -1
USP3-216ENST00000559873 INTS14Q96SY0 518 aa8.78□□□□□ -1
USP3-216ENST00000559873 MBOAT4Q96T53 435 aa8.78□□□□□ -1
USP3-216ENST00000559873 ADI1Q9BV57 179 aa8.78□□□□□ -1
USP3-216ENST00000559873 OR2H1Q9GZK4 316 aa8.78□□□□□ -1
USP3-216ENST00000559873 HDHD2Q9H0R4 259 aa8.78□□□□□ -1
USP3-216ENST00000559873 CLEC4MQ9H2X3 399 aaPredicted RBP8.78□□□□□ -1
USP3-216ENST00000559873 B3GNT2Q9NY97 397 aa8.78□□□□□ -1
USP3-216ENST00000559873 ZNF224Q9NZL3 707 aa8.78□□□□□ -1
USP3-216ENST00000559873 NKX1-2Q9UD57 310 aaPredicted RBP8.78□□□□□ -1
USP3-216ENST00000559873 ATPIF1Q9UII2 106 aa8.78□□□□□ -1
USP3-216ENST00000559873 POU2F3Q9UKI9 436 aa8.78□□□□□ -1
USP3-216ENST00000559873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.78□□□□□ -1
USP3-216ENST00000559873 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
USP3-216ENST00000559873 COMMD3-BMI1R4GMX3 469 aa8.78□□□□□ -1
USP3-216ENST00000559873 FAM171A2A8MVW0 826 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 H0YAE9 185 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ABCD4O14678 606 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 DOK2O60496 412 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 CTAG2O75638 210 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 SERPINA5P05154 406 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 MMP7P09237 267 aaPredicted RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 SPARCP09486 303 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 CECR9P0C854 216 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 COX5BP10606 129 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 CLUP10909 449 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 POLR2IP36954 125 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 CDH11P55287 796 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 RPS23P62266 143 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 APOFQ13790 326 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ENDOGQ14249 297 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 RAB35Q15286 201 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 LINC01590Q5TEZ4 76 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ZNF787Q6DD87 383 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ARL9Q6T311 187 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 SLC22A25Q6T423 547 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ZNF704Q6ZNC4 412 aaPredicted RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 SHFQ7M4L6 423 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 ERI1Q8IV48 349 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 PIAS4Q8N2W9 510 aaPredicted RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 ZNF454Q8N9F8 522 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 SLC30A7Q8NEW0 376 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 OR51L1Q8NGJ5 315 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 IPCEF1Q8WWN9 437 aaPredicted RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 FBXO17Q96EF6 278 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 CNN2Q99439 309 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 C1QTNF6Q9BXI9 259 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 MED20Q9H944 212 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 CDH20Q9HBT6 801 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 RASSF1Q9NS23 344 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 FAIMQ9NVQ4 179 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 FAM118AQ9NWS6 357 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 PLEK2Q9NYT0 353 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 WARS2Q9UGM6 360 aaKnown RBP8.77□□□□□ -1.01
USP3-216ENST00000559873 EDARQ9UNE0 448 aa8.77□□□□□ -1.01
USP3-216ENST00000559873 IGHV1-18A0A0C4DH31 117 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 ZNF503-AS2A6NEH8 195 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 TVP23AA6NH52 213 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 VSTM5A8MXK1 200 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 M0R129 80 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 TFP02787 698 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 PATE4P0C8F1 98 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 ZNF14P17017 642 aaPredicted RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 SLC2A5P22732 501 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 HTR5AP47898 357 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 GDI2P50395 445 aaKnown RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 SNRPGP62308 76 aaKnown RBP8.76□□□□□ -1.01
USP3-216ENST00000559873 PSG4Q00888 419 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 IL5RAQ01344 420 aa8.76□□□□□ -1.01
USP3-216ENST00000559873 NAAAQ02083 359 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms