RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RFC3P40938 356 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 P2RY2P41231 377 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 GLP1RP43220 463 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 BTDP43251 543 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ACTA2P62736 377 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ACTG2P63267 376 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ACTC1P68032 377 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ACTA1P68133 377 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 NDPQ00604 133 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 SP4Q02446 784 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 GABRA6Q16445 453 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 LRRC36Q1X8D7 754 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 NHLRC3Q5JS37 347 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 EOGTQ5NDL2 527 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 MARC1Q5VT66 337 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 C1orf94Q6P1W5 598 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ZNF600Q6ZNG1 722 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 PEX26Q7Z412 305 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ABHD12BQ7Z5M8 362 aaPredicted RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 ZNF546Q86UE3 836 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ZNF547Q8IVP9 402 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 KIF2BQ8N4N8 673 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 C11orf42Q8N5U0 333 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 OR10G3Q8NGC4 313 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 OR6K6Q8NGW6 343 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 OR51F2Q8NH61 342 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 CCDC26Q8TAB7 109 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ACOT11Q8WXI4 607 aaPredicted RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 BAALCQ8WXS3 180 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 CHCHD10Q8WYQ3 142 aaPredicted RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 GTF2H4Q92759 462 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 TNFRSF14Q92956 283 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 RPEQ96AT9 228 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 DNAJC1Q96KC8 554 aaKnown RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 LINC00167Q96N53 147 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 RARRES2Q99969 163 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 YTHDF1Q9BYJ9 559 aaKnown RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 NAA50Q9GZZ1 169 aaKnown RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 C20orf85Q9H1P6 137 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 OR51J1Q9H342 316 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 TMEM38AQ9H6F2 299 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 CTPS2Q9NRF8 586 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 MS4A12Q9NXJ0 267 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 EURLQ9NYK6 297 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 GNPTGQ9UJJ9 305 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 SLC22A14Q9Y267 594 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 V9GYY9 64 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 ATRXP46100 2492 aa2.69□□□□□ -1.98
SPG11-218ENST00000559754 CFAP65Q6ZU64 1925 aaKnown RBP2.69□□□□□ -1.98
SPG11-218ENST00000559754 NOTCH2Q04721 2471 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 GON4LQ3T8J9 2241 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 IGHV1OR15-1A0A075B7D0 117 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 TRAV9-2A0A087WT02 112 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 A0A0G2JRQ6 117 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 ERVV-1B6SEH8 477 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 SMKR1H3BMG3 65 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 SAP18O00422 153 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 MPDU1O75352 247 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 KBTBD11O94819 623 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PNMA6AP0CW24 399 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 PSMC3P17980 439 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PSMB6P28072 239 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 NTSP30990 170 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 GPR6P46095 362 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 DNASE1L1P49184 302 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PLTPP55058 493 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 SKP1P63208 163 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 IRX3P78415 501 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 ZNF92Q03936 586 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 SLAMF1Q13291 335 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PMS2P3Q13401 168 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 UNC119Q13432 240 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 GGTLC2Q14390 218 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 TNXAQ16473 311 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 ATP6V1FQ16864 119 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 APOBEC3HQ6NTF7 200 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 CXCL17Q6UXB2 119 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 Q6ZVH6 145 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PRSS41Q7RTY9 318 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 ZNF571Q7Z3V5 609 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 TMEM150AQ86TG1 271 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CYP4Z1Q86W10 505 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CADM2Q8N3J6 435 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 DNAAF3Q8N9W5 541 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 HSD17B11Q8NBQ5 300 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 VN1R2Q8NFZ6 395 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CDKL2Q92772 493 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 ITFG2Q969R8 447 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 FGGYQ96C11 551 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 LRRC45Q96CN5 670 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 PIK3IP1Q96FE7 263 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 CENPNQ96H22 339 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 NOL4LQ96MY1 436 aaPredicted RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 SERPINB12Q96P63 405 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 RIOK2Q9BVS4 552 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 CALN1Q9BXU9 219 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 NXF3Q9H4D5 531 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 RNF167Q9H6Y7 350 aa2.68□□□□□ -1.98
SPG11-218ENST00000559754 ISG20L2Q9H9L3 353 aaKnown RBP2.68□□□□□ -1.98
SPG11-218ENST00000559754 EML4Q9HC35 981 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms