RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 NAXEQ8NCW5 288 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 OR6X1Q8NH79 312 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 TBC1D15Q8TC07 691 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 INTS12Q96CB8 462 aaKnown RBP14.61□□□□□ -0.07
TPM1-219ENST00000559397 INTS14Q96SY0 518 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 PMF1-BGLAPU3KQ54 211 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 TRDV1A0A1B0GX56 115 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 CENPBD1B2RD01 187 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 PLPP2O43688 288 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 CLPXO76031 633 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 IL2RAP01589 272 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 AGTR1P30556 359 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 FGF9P31371 208 aaPredicted RBP14.61□□□□□ -0.07
TPM1-219ENST00000559397 PEX19P40855 299 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 DGUOKQ16854 277 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 TMEM211Q6ICI0 200 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 DNM1P34Q6PK57 102 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 HDDC2Q7Z4H3 204 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 TMEM45BQ96B21 275 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 PELI1Q96FA3 418 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 ZFP3Q96NJ6 502 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 COQ7Q99807 217 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 SLIRPQ9GZT3 109 aaKnown RBP14.61□□□□□ -0.07
TPM1-219ENST00000559397 WDR76Q9H967 626 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 SIAEQ9HAT2 523 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 MRPL22Q9NWU5 206 aaKnown RBP14.61□□□□□ -0.07
TPM1-219ENST00000559397 TXNL4BQ9NX01 149 aaKnown RBP14.61□□□□□ -0.07
TPM1-219ENST00000559397 EMC3Q9P0I2 261 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 KLHDC2Q9Y2U9 406 aa14.61□□□□□ -0.07
TPM1-219ENST00000559397 ZNF462Q96JM2 2506 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 PNMA8CA0A1B0GUJ8 204 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 PRR32B1ATL7 298 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 CCL21O00585 134 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 GPR171O14626 319 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 OGG1O15527 345 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 LRRTM2O43300 516 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 TNFSF13O75888 250 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 GPANK1O95872 356 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 TMIGD3P0DMS9 266 aaPredicted RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 GAAP10253 952 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 ALOX5APP20292 161 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 GALP22466 123 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 KIR2DL2P43627 348 aaPredicted RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 CLDN17P56750 224 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 ETFDHQ16134 617 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 TP53I3Q53FA7 332 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 DMKNQ6E0U4 476 aaPredicted RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 LINC00299Q6ZSB3 139 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 FAM214BQ7L5A3 538 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 NUFIP2Q7Z417 695 aaKnown RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 SYT14Q8NB59 555 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 PRR7Q8TB68 274 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 SNX33Q8WV41 574 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 TMEM203Q969S6 136 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 SLC25A44Q96H78 314 aaPredicted RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 EMC6Q9BV81 110 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 RERGLQ9H628 205 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 EXOSC4Q9NPD3 245 aaKnown RBP14.6□□□□□ -0.07
TPM1-219ENST00000559397 ST6GALNAC2Q9UJ37 374 aa14.6□□□□□ -0.07
TPM1-219ENST00000559397 A0A0G2JNJ9 132 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 KHDRBS3O75525 346 aaKnown RBP14.59□□□□□ -0.07
TPM1-219ENST00000559397 ZNF432O94892 652 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 CRHP06850 196 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 PGA4P0DJD7 388 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 PGA3P0DJD8 388 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 SERPINB10P48595 397 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 PER3P56645 1201 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 FABP5Q01469 135 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 GLO1Q04760 184 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 KCTD20Q7Z5Y7 419 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 ADAD1Q96M93 576 aaKnown RBP14.59□□□□□ -0.07
TPM1-219ENST00000559397 CCDC59Q9P031 241 aaKnown RBP14.59□□□□□ -0.07
TPM1-219ENST00000559397 Q9UFV3 132 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 COA3Q9Y2R0 106 aaPredicted RBP14.59□□□□□ -0.07
TPM1-219ENST00000559397 NOSIPQ9Y314 301 aaKnown RBP14.59□□□□□ -0.07
TPM1-219ENST00000559397 TMEM14AQ9Y6G1 99 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 MYO7BQ6PIF6 2116 aa14.59□□□□□ -0.07
TPM1-219ENST00000559397 IGKV1D-43A0A0B4J1Z2 117 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 A0A1B0GUH1 482 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 SLC35F4A4IF30 521 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 MAGEB4O15481 346 aaPredicted RBP14.58□□□□□ -0.07
TPM1-219ENST00000559397 ABHD16AO95870 558 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 IGHG1P01857 330 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 HLA-DPB1P04440 258 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 CD1AP06126 327 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 PSKH1P11801 424 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 SELENOPP49908 381 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 GBX2P52951 348 aaPredicted RBP14.58□□□□□ -0.07
TPM1-219ENST00000559397 FMODQ06828 376 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 HIST3H3Q16695 136 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 THEM4Q5T1C6 240 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 PLEKHG7Q6ZR37 379 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 DPY19L4Q7Z388 723 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 FJX1Q86VR8 437 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 NOXO1Q8NFA2 376 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 SLC26A10Q8NG04 563 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 OR6N2Q8NGY6 317 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 OTOSQ8NHW6 89 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 RPS4Y2Q8TD47 263 aa14.58□□□□□ -0.07
TPM1-219ENST00000559397 RNF166Q96A37 237 aaPredicted RBP14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms