RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 BPESC1Q9GZL8 116 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 LRMDAQ9H2I8 198 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 EMC7Q9NPA0 242 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 ADAM21Q9UKJ8 722 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 PRPF19Q9UMS4 504 aaKnown RBP9.39□□□□□ -0.91
SPG11-216ENST00000559347 IER3IP1Q9Y5U9 82 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 LYVE1Q9Y5Y7 322 aa9.39□□□□□ -0.91
SPG11-216ENST00000559347 A0A1W2PPW3 197 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 C5orf49A4QMS7 147 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 C12orf71A8MTZ7 269 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 TLX2O43763 284 aaPredicted RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 NCR1O76036 304 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 STAMBPO95630 424 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 CLPTM1O96005 669 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 LCKP06239 509 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 APEHP13798 732 aaKnown RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 ZNF16P17020 682 aaPredicted RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 USF1P22415 310 aaPredicted RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 CCNOP22674 350 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 GIFP27352 417 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 SLC6A6P31641 620 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 GUCA1AP43080 201 aaPredicted RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 RAD52P43351 418 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 GSSP48637 474 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 RPS6KA3P51812 740 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 UCP2P55851 309 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 KLF3P57682 345 aaPredicted RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 PCBD1P61457 104 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 TSPAN31Q12999 210 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 AQP6Q13520 282 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 TRIM25Q14258 630 aaKnown RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 GGTLC2Q14390 218 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 C6orf52Q5T4I8 152 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 ZNF774Q6NX45 483 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 C1orf94Q6P1W5 598 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 UGT2A3Q6UWM9 527 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 RFPL4BQ6ZWI9 263 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 OR1J1Q8NGS3 322 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 SYNPRQ8TBG9 265 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 CCDC124Q96CT7 223 aaKnown RBP9.38□□□□□ -0.91
SPG11-216ENST00000559347 ASB9Q96DX5 294 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 FOXN4Q96NZ1 517 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 BTBD10Q9BSF8 475 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 C1orf21Q9H246 121 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 MS4A5Q9H3V2 200 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 MAGIXQ9H6Y5 334 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 REV1Q9UBZ9 1251 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 DUSP13Q9UII6 198 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 TMCC3Q9ULS5 477 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 TIMM10BQ9Y5J6 103 aa9.38□□□□□ -0.91
SPG11-216ENST00000559347 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 IGHV4-61A0A0C4DH41 118 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 DCTN6O00399 190 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ARPC3O15145 178 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 DOK2O60496 412 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 SLC16A7O60669 478 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 KHDRBS3O75525 346 aaKnown RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 KRT36O76013 467 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 IGHV4-31P0DP07 118 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 GAAP10253 952 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 NAT2P11245 290 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 IFNGR2P38484 337 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 CDKN2AP42771 156 aaKnown RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 GDI2P50395 445 aaKnown RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 HMGA2P52926 109 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 MS4A2Q01362 244 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 SCRN3Q0VDG4 424 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 RFX4Q33E94 735 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ALKBH6Q3KRA9 238 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 TMEM255AQ5JRV8 349 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ELFN2Q5R3F8 820 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 SPATA46Q5T0L3 261 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 LEG1Q6P5S2 330 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 DHFR2Q86XF0 187 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 GLB1L2Q8IW92 636 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ALDH16A1Q8IZ83 802 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ZNF786Q8N393 782 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 OR9Q2Q8NGE9 314 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 OR4C15Q8NGM1 316 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 UBASH3BQ8TF42 649 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 IPCEF1Q8WWN9 437 aaPredicted RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 C11orf40Q8WZ69 217 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 CLPTM1LQ96KA5 538 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 SAMD8Q96LT4 415 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 TSSK2Q96PF2 358 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 ERMAPQ96PL5 475 aaPredicted RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 WACQ9BTA9 647 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 NUAK2Q9H093 628 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 TAS2R1Q9NYW7 299 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 TAAR3PQ9P1P4 343 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 NDRG4Q9ULP0 352 aaKnown RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 COA3Q9Y2R0 106 aaPredicted RBP9.37□□□□□ -0.91
SPG11-216ENST00000559347 JMJD1CQ15652 2540 aa9.37□□□□□ -0.91
SPG11-216ENST00000559347 IGLV1-36A0A0B4J1U3 117 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 LYNX1G3V0Z9 82 aa9.36□□□□□ -0.91
SPG11-216ENST00000559347 TNFRSF11BO00300 401 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms