RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 U3KQV3 271 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 HRNRQ86YZ3 2850 aaPredicted RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 PLCE1Q9P212 2302 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 IGKV1D-43A0A0B4J1Z2 117 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 DHRS12A0PJE2 317 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 H3BN98 237 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 H7C1C5 153 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TPD52L2O43399 206 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 SGCEO43556 437 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SYNGR3O43761 229 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 GPRIN2O60269 458 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 NDUFS7O75251 213 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 E2F6O75461 281 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 UBOX5O94941 541 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 PPP1R3DO95685 299 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ABHD16AO95870 558 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TXNDC12O95881 172 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 GASTP01350 101 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 IFNGP01579 166 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 HEXAP06865 529 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ADRA2AP08913 450 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 MMP7P09237 267 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 COX5BP10606 129 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CCL2P13500 99 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CTLA4P16410 223 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF32P17041 273 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ATP6V1B2P21281 511 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TUBG1P23258 451 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 APEX1P27695 318 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 LIPAP38571 399 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 GSSP48637 474 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 KLF3P57682 345 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 LSM6P62312 80 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 LCN6P62502 163 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 PSG4Q00888 419 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 MS4A2Q01362 244 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 HGFACQ04756 655 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 COX10Q12887 443 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 FHL1Q13642 323 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CARTPTQ16568 116 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF718Q3SXZ3 478 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SLC36A3Q495N2 470 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 IQCCQ4KMZ1 466 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 MESTQ5EB52 335 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZMAT1Q5H9K5 638 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CLEC12AQ5QGZ9 265 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 PGBD2Q6P3X8 592 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 LEG1Q6P5S2 330 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TMEM154Q6P9G4 183 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF620Q6ZNG0 422 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 MYPOPQ86VE0 399 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF584Q8IVC4 421 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 WDFY1Q8IWB7 410 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CIARTQ8N365 385 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF525Q8N782 197 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 AQP11Q8NBQ7 271 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CPEB3Q8NE35 698 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 GJC3Q8NFK1 279 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR2T33Q8NG76 320 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR10H5Q8NGA6 315 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR5L1Q8NGL2 311 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR1J1Q8NGS3 322 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR2AJ1Q8NGZ0 328 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR2T4Q8NH00 348 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR4K13Q8NH42 304 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ABHD4Q8TB40 342 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SYNPRQ8TBG9 265 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TEX47Q8TBZ9 253 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CANT1Q8WVQ1 401 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 IPCEF1Q8WWN9 437 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 NABP1Q96AH0 204 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 RASD2Q96D21 266 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 NMD3Q96D46 503 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 CLPTM1LQ96KA5 538 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 C4orf45Q96LM5 186 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SAMD8Q96LT4 415 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF75AQ96N20 296 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SORCS2Q96PQ0 1159 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 NMNAT3Q96T66 252 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 DOK1Q99704 481 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SYT3Q9BQG1 590 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 FUZQ9BT04 418 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 ZNF416Q9BWM5 594 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR2H1Q9GZK4 316 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 NUAK2Q9H093 628 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 OR51B6Q9H340 312 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 SRA1Q9HD15 236 aaKnown RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 POLE4Q9NR33 117 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TUBG2Q9NRH3 451 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CYSLTR2Q9NS75 346 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 DECR2Q9NUI1 292 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 TBC1D23Q9NUY8 699 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 PLEK2Q9NYT0 353 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 IL20Q9NYY1 176 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 VSX1Q9NZR4 365 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 ASH2LQ9UBL3 628 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 CGGBP1Q9UFW8 167 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 BAIAP2Q9UQB8 552 aa3.77□□□□□ -1.81
SNX1-205ENST00000559339 COA3Q9Y2R0 106 aaPredicted RBP3.77□□□□□ -1.81
SNX1-205ENST00000559339 UGT2A1Q9Y4X1 527 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms