RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 UBE2NP61088 152 aaKnown RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 RAB1AP62820 205 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 HIST1H3AP68431 136 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 HGFACQ04756 655 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 SLC34A1Q06495 639 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 SNAPC1Q16533 368 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 GSG1Q2KHT4 349 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 NRN1LQ496H8 165 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 CCDC92Q53HC0 331 aaPredicted RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 BEX5Q5H9J7 111 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 PABPC1L2AQ5JQF8 200 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 HIST2H3PS2Q5TEC6 136 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 SLC18B1Q6NT16 456 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 ZNF774Q6NX45 483 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 CFAP77Q6ZQR2 320 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 HIST2H3AQ71DI3 136 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 CXXC5Q7LFL8 322 aaKnown RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 SLC16A14Q7RTX9 510 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 RFLNBQ8N5W9 214 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 PROKR2Q8NFJ6 384 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 FNDC8Q8TC99 324 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 APH1BQ8WW43 257 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 SLC7A6Q92536 515 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 ZMYND19Q96E35 227 aaPredicted RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 MAP6Q96JE9 813 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 HRASLS5Q96KN8 279 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 SLC38A2Q96QD8 506 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 OR2H1Q9GZK4 316 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 OR51V1Q9H2C8 321 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 PLEKHF2Q9H8W4 249 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 OBP2BQ9NPH6 170 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 PNRC2Q9NPJ4 139 aaKnown RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 FAM118AQ9NWS6 357 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 ASH2LQ9UBL3 628 aa9.45□□□□□ -0.9
TPM1-217ENST00000559108 NDRG4Q9ULP0 352 aaKnown RBP9.45□□□□□ -0.9
TPM1-217ENST00000559108 LOC100509620A0A075B734 347 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 IGHV2OR16-5A0A0B4J2B6 119 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 ABCD4O14678 606 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 RER1O15258 196 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 TLX2O43763 284 aaPredicted RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 IFNGP01579 166 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 CST2P09228 141 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 NR2C1P13056 603 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 HOXB1P14653 301 aaPredicted RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 APEX1P27695 318 aaKnown RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 CRABP1P29762 137 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 CENPAP49450 140 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 NAAAQ02083 359 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 TEKQ02763 1124 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 HSF2Q03933 536 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 RSPO1Q2MKA7 263 aaPredicted RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 TMEM255AQ5JRV8 349 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 ZNF704Q6ZNC4 412 aaPredicted RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 CDC20BQ86Y33 519 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 TIGD4Q8IY51 512 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 FAM169BQ8N8A8 192 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 OR2T4Q8NH00 348 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 FAM81AQ8TBF8 368 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 OTULINQ96BN8 352 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 MUCL1Q96DR8 90 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 MARCH7Q9H992 704 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 SMPD3Q9NY59 655 aaPredicted RBP9.44□□□□□ -0.9
TPM1-217ENST00000559108 DNAJC27Q9NZQ0 273 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 MOKQ9UQ07 419 aa9.44□□□□□ -0.9
TPM1-217ENST00000559108 CSMD1Q96PZ7 3565 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 TACC2O95359 2948 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 DSCAMO60469 2012 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 C5orf63A6NC05 138 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 E7EQL1 145 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 PRR23D1E9PI22 279 aaPredicted RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 CASKO14936 926 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 SYNGR3O43761 229 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 GLCEO94923 617 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 UBL3O95164 117 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 HMGN1P05114 100 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 DBHP09172 617 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 GNAO1P09471 354 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 PRR23D2P0DMB1 279 aaPredicted RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 ZNF35P13682 527 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 NPR2P20594 1047 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 GSTT1P30711 240 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 HOXC12P31275 282 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 ARR3P36575 388 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 WNT5AP41221 380 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 HCCSP53701 268 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 RAD23AP54725 363 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 LSM6P62312 80 aaKnown RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 ADARB1P78563 741 aaKnown RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 RIPK1Q13546 671 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 APOFQ13790 326 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 PCK2Q16822 640 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 SLC36A2Q495M3 483 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 LAIR2Q6ISS4 152 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 DNM1P34Q6PK57 102 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 VASH1Q7L8A9 365 aaPredicted RBP9.43□□□□□ -0.9
TPM1-217ENST00000559108 TMEM200AQ86VY9 491 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 ENTHD1Q8IYW4 607 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 OR6K6Q8NGW6 343 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 TMEM163Q8TC26 289 aa9.43□□□□□ -0.9
TPM1-217ENST00000559108 ST7LQ8TDW4 575 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms