RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SLC25A1P53007 311 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 CDH11P55287 796 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 HIST1H3AP68431 136 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 PTGES3Q15185 160 aaKnown RBP9.89□□□□□ -0.83
SNX1-204ENST00000559061 MST1LQ2TV78 715 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 CCDC92Q53HC0 331 aaPredicted RBP9.89□□□□□ -0.83
SNX1-204ENST00000559061 PABPC1L2AQ5JQF8 200 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 HIST2H3PS2Q5TEC6 136 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 SLX4IPQ5VYV7 408 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 C12orf73Q69YU5 71 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 C11orf71Q6IPW1 123 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 SLC27A4Q6P1M0 643 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 HIST2H3AQ71DI3 136 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 CDH24Q86UP0 819 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 ZDHHC13Q8IUH4 622 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 GLB1L2Q8IW92 636 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 DNAJC9Q8WXX5 260 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 MBOAT4Q96T53 435 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 OR2H1Q9GZK4 316 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 RERGLQ9H628 205 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 NGBQ9NPG2 151 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 PNRC2Q9NPJ4 139 aaKnown RBP9.89□□□□□ -0.83
SNX1-204ENST00000559061 KRT84Q9NSB2 600 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 USE1Q9NZ43 259 aa9.89□□□□□ -0.83
SNX1-204ENST00000559061 CCDC182A6NF36 153 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 TVP23AA6NH52 213 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 PRKYO43930 277 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 GPRIN2O60269 458 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 RENP00797 406 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 NR2C1P13056 603 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 IGFBP5P24593 272 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 APEX1P27695 318 aaKnown RBP9.88□□□□□ -0.83
SNX1-204ENST00000559061 WNT5AP41221 380 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 DAG1Q14118 895 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 TESK1Q15569 626 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
SNX1-204ENST00000559061 KRTAP27-1Q3LI81 207 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 ZNF774Q6NX45 483 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 CORO6Q6QEF8 472 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 CFAP77Q6ZQR2 320 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 VASH1Q7L8A9 365 aaPredicted RBP9.88□□□□□ -0.83
SNX1-204ENST00000559061 BCDIN3DQ7Z5W3 292 aaKnown RBP9.88□□□□□ -0.83
SNX1-204ENST00000559061 CBR4Q8N4T8 237 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 ZNF611Q8N823 705 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 OR10S1Q8NGN2 331 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 NANOS1Q8WY41 292 aaKnown RBP9.88□□□□□ -0.83
SNX1-204ENST00000559061 POM121L2Q96KW2 1035 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 WDR76Q9H967 626 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 KIF17Q9P2E2 1029 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 ASH2LQ9UBL3 628 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 KLHL21Q9UJP4 597 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 MAST4O15021 2626 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 NAV2Q8IVL1 2488 aa9.88□□□□□ -0.83
SNX1-204ENST00000559061 OR6C6A6NF89 314 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 OVOL3O00110 214 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 RER1O15258 196 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SYNGR3O43761 229 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 FARS2O95363 451 aaKnown RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 RAB36O95755 333 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 CRABP1P29762 137 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ARHGDIAP52565 204 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ERVS71-1P61550 626 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 LSM6P62312 80 aaKnown RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 ESRRGP62508 458 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ELF3P78545 371 aaPredicted RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 TEKQ02763 1124 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 HSF2Q03933 536 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 RCN1Q15293 331 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ADIPOQQ15848 244 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 PCK2Q16822 640 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SLC36A2Q495M3 483 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 FBXW10Q5XX13 1052 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SLC18B1Q6NT16 456 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 PLBD1Q6P4A8 553 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SLC22A25Q6T423 547 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 DTX2Q86UW9 622 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 LINC00346Q8IVM7 164 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ZNF101Q8IZC7 436 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SLC30A7Q8NEW0 376 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 NUP37Q8NFH4 326 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 TMEM171Q8WVE6 324 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 SLC7A6Q92536 515 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 MAP6Q96JE9 813 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 TRAF4Q9BUZ4 470 aaPredicted RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 MARCH7Q9H992 704 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 ZNF556Q9HAH1 456 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 CISD1Q9NZ45 108 aaKnown RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 NKX1-2Q9UD57 310 aaPredicted RBP9.87□□□□□ -0.83
SNX1-204ENST00000559061 CYB5R1Q9UHQ9 305 aa9.87□□□□□ -0.83
SNX1-204ENST00000559061 MYO9AB2RTY4 2548 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 TMEM129A0AVI4 362 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 RIIAD1A6NNX1 92 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 ICMTO60725 284 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 SNAP29O95721 258 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 RAF1P04049 648 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 ANPEPP15144 967 aa9.86□□□□□ -0.83
SNX1-204ENST00000559061 ZNF3P17036 446 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms