RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 OR6S1Q8NH40 331 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 SPATA3Q8NHX4 192 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 FGFBP3Q8TAT2 258 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 TMEM255BQ8WV15 326 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 MRPL24Q96A35 216 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 BOD1Q96IK1 185 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 TPD52L3Q96J77 140 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ZNF347Q96SE7 839 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 DOK1Q99704 481 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ZNF385DQ9H6B1 395 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 KAT8Q9H7Z6 458 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 MYOZ1Q9NP98 299 aaPredicted RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 FGFR1OP2Q9NVK5 253 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 TAS2R5Q9NYW4 299 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 GLTPQ9NZD2 209 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 MYEF2Q9P2K5 600 aaKnown RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 LPAR3Q9UBY5 353 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 PRDM4Q9UKN5 801 aa6.29□□□□□ -1.4
SPG11-213ENST00000558988 ZNF469Q96JG9 3925 aaPredicted RBP6.29□□□□□ -1.4
SPG11-213ENST00000558988 LOC100653049A0A140TA62 436 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 A0A1W2PRG6 482 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 DHHO43323 396 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SYNGR3O43761 229 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 PIP5K1CO60331 668 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 FMO6PO60774 539 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 KRT34O76011 436 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 LYPD3O95274 346 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SLC2A10O95528 541 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 ABHD16AO95870 558 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 IGHG1P01857 330 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 VIMP08670 466 aaKnown RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 OR8G3PP0DMU2 310 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 TROVE2P10155 538 aaKnown RBP eCLIP6.28□□□□□ -1.4
SPG11-213ENST00000558988 ZNF14P17017 642 aaPredicted RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 FUT1P19526 365 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 CDAP32320 146 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 AQP2P41181 271 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 YAP1P46937 504 aaKnown RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 ZNF84P51523 738 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 UGT2B15P54855 530 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 RPS23P62266 143 aaKnown RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 HSF2Q03933 536 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 RUNX1T1Q06455 604 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 FMODQ06828 376 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 RPL18Q07020 188 aaKnown RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 CD47Q08722 323 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 CYLC2Q14093 348 aaPredicted RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 KRTAP24-1Q3LI83 254 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 TM4SF20Q53R12 229 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 REP15Q6BDI9 236 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 RGS7BPQ6MZT1 257 aaPredicted RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 NANOGP8Q6NSW7 305 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 TMEM53Q6P2H8 277 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SLC16A14Q7RTX9 510 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 IGFN1Q86VF2 1251 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 NKAIN4Q8IVV8 208 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SLC30A8Q8IWU4 369 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SLC22A24Q8N4F4 322 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 PAQR4Q8N4S7 273 aaPredicted RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 ZNF540Q8NDQ6 660 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SLC30A7Q8NEW0 376 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 IL17RDQ8NFM7 739 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 OR6X1Q8NH79 312 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 NSMAFQ92636 917 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 LRRC58Q96CX6 371 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 SGTBQ96EQ0 304 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 LRR1Q96L50 414 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 EVA1AQ9H8M9 152 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 NANOGQ9H9S0 305 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 MEPEQ9NQ76 525 aaPredicted RBP6.28□□□□□ -1.4
SPG11-213ENST00000558988 C20orf141Q9NUB4 165 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 TMEM38BQ9NVV0 291 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 B3GNT2Q9NY97 397 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 ZNF224Q9NZL3 707 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 RHCGQ9UBD6 479 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 ZNF229Q9UJW7 825 aa6.28□□□□□ -1.4
SPG11-213ENST00000558988 IQCMA0A1B0GVH7 501 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 PPIHO43447 177 aaKnown RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 NCR1O76036 304 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 OR7A10O76100 309 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 CLPTM1O96005 669 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SERPINA5P05154 406 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 IGFBP1P08833 259 aaPredicted RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 PGA4P0DJD7 388 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 PGA3P0DJD8 388 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SAGP10523 405 aaPredicted RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 ZNF35P13682 527 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 COL8A2P25067 703 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 GPR6P46095 362 aaPredicted RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 ARFIP2P53365 341 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 CRYBA2P53672 197 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 CCL8P80075 99 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 PIN1Q13526 163 aaPredicted RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 SGCAQ16586 387 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 TBC1D28Q2M2D7 210 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SLC36A2Q495M3 483 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 AVPI1Q5T686 147 aa6.27□□□□□ -1.41
SPG11-213ENST00000558988 PIWIL3Q7Z3Z3 882 aaKnown RBP6.27□□□□□ -1.41
SPG11-213ENST00000558988 ZNF584Q8IVC4 421 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms