RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 OR4K5Q8NGD3 323 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 ZNF519Q8TB69 540 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 GTF2H4Q92759 462 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 DVL3Q92997 716 aaPredicted RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 TMEM54Q969K7 222 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SLC47A1Q96FL8 570 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 MAELQ96JY0 434 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 C1orf147Q96MC9 270 aaPredicted RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 GAL3ST1Q99999 423 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TMEM109Q9BVC6 243 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 CDH20Q9HBT6 801 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 DDX28Q9NUL7 540 aaKnown RBP8.17□□□□□ -1.1
SPG11-212ENST00000558790 NKIRAS2Q9NYR9 191 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 GLTPQ9NZD2 209 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SELENONQ9NZV5 590 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 ZIM2Q9NZV7 527 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 TENM3Q9P273 2699 aa8.17□□□□□ -1.1
SPG11-212ENST00000558790 SLC22A23A1A5C7 686 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 ISPDA4D126 451 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 SNNO75324 88 aaPredicted RBP8.16□□□□□ -1.1
SPG11-212ENST00000558790 MFN2O95140 757 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 PGA4P0DJD7 388 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 PGA3P0DJD8 388 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 OR8G3PP0DMU2 310 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 CDH12P55289 794 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 SELENOVP59797 346 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 FOXL1Q12952 345 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 OR1Q1Q15612 314 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 TBC1D28Q2M2D7 210 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 HFEQ30201 348 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 GCNT6Q5T4J0 391 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 MBNL2Q5VZF2 373 aaKnown RBP8.16□□□□□ -1.1
SPG11-212ENST00000558790 SLC35D2Q76EJ3 337 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 MSRB3Q8IXL7 192 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 OR5J2Q8NH18 312 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 OR6X1Q8NH79 312 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 ZNF566Q969W8 418 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 ZBTB9Q96C00 473 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 LRRC58Q96CX6 371 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 TIMD4Q96H15 378 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 PAIP2Q9BPZ3 127 aaKnown RBP8.16□□□□□ -1.1
SPG11-212ENST00000558790 BCL2L14Q9BZR8 327 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 C1orf198Q9H425 327 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 RAD21L1Q9H4I0 556 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 UNKLQ9H9P5 680 aaKnown RBP8.16□□□□□ -1.1
SPG11-212ENST00000558790 NTN4Q9HB63 628 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 DECR2Q9NUI1 292 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 SLCO1C1Q9NYB5 712 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 SLC25A37Q9NYZ2 338 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 UBAP1Q9NZ09 502 aa8.16□□□□□ -1.1
SPG11-212ENST00000558790 ZSCAN5BA6NJL1 495 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 M0R3H8 397 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 DHHO43323 396 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 TMEM127O75204 238 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 FARS2O95363 451 aaKnown RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 MT-ATP6P00846 226 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 IGHV1-46P01743 117 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 DRD4P21917 467 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 PRTN3P24158 256 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 AQP1P29972 269 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 ZNF81P51508 661 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 UCP2P55851 309 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 CDK6Q00534 326 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 ARMCX4Q5H9R4 360 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 CEP85LQ5SZL2 805 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 SPATA46Q5T0L3 261 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 REEP3Q6NUK4 255 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 TMEM53Q6P2H8 277 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 DOK3Q7L591 496 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 SLC16A14Q7RTX9 510 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 RANBP3LQ86VV4 465 aaPredicted RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 KRT73Q86Y46 540 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 ZNF101Q8IZC7 436 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 ANKRD42Q8N9B4 389 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 RBM15BQ8NDT2 890 aaKnown RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 DEFB108BQ8NET1 73 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 IPCEF1Q8WWN9 437 aaPredicted RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 C11orf40Q8WZ69 217 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 CFHR4Q92496 578 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 CCL17Q92583 94 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 TAF15Q92804 592 aaKnown RBP eCLIP8.15□□□□□ -1.1
SPG11-212ENST00000558790 RAB1CQ92928 201 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 SLC7A6OSQ96CW6 309 aaPredicted RBP8.15□□□□□ -1.1
SPG11-212ENST00000558790 ELMOD3Q96FG2 381 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 OR52B2Q96RD2 323 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 SPATA5L1Q9BVQ7 753 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 CENPHQ9H3R5 247 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 IKZF5Q9H5V7 419 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 RNF121Q9H920 327 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 TMEM27Q9HBJ8 222 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 ING3Q9NXR8 418 aa8.15□□□□□ -1.1
SPG11-212ENST00000558790 KRTAP9-6A0A140TA67 174 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 KPNA4O00629 521 aaPredicted RBP8.14□□□□□ -1.11
SPG11-212ENST00000558790 UBDO15205 165 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 SPRY3O43610 288 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 CHP2O43745 196 aa8.14□□□□□ -1.11
SPG11-212ENST00000558790 ENTPD5O75356 428 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms