RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 THAP5Q7Z6K1 395 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 LRP11Q86VZ4 500 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 NKAIN4Q8IVV8 208 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 OFCC1Q8IZS5 231 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 RFLNBQ8N5W9 214 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 SYT14Q8NB59 555 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 ICA1LQ8NDH6 482 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 FGFBP3Q8TAT2 258 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF519Q8TB69 540 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 SYNPRQ8TBG9 265 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 LIPHQ8WWY8 451 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 C11orf40Q8WZ69 217 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 MEGF10Q96KG7 1140 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 ALG12Q9BV10 488 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 C19orf24Q9BVV8 132 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 MRPL13Q9BYD1 178 aaKnown RBP6.9□□□□□ -1.3
TRAF3-205ENST00000558700 NDEL1Q9GZM8 345 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 OR51B6Q9H340 312 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 HINT3Q9NQE9 182 aaKnown RBP6.9□□□□□ -1.3
TRAF3-205ENST00000558700 SAR1AQ9NR31 198 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 ZNF275Q9NSD4 429 aaPredicted RBP6.9□□□□□ -1.3
TRAF3-205ENST00000558700 C20orf141Q9NUB4 165 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 FZR1Q9UM11 496 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 GRIP1Q9Y3R0 1128 aa6.9□□□□□ -1.3
TRAF3-205ENST00000558700 ELOVL7A1L3X0 281 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 A6NIZ1 184 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 C17orf100A8MU93 164 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 H3BS24 57 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 H3BSA7 217 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF561-AS1K7EIQ3 104 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 PPIHO43447 177 aaKnown RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TCF21O43680 179 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 SHOX2O60902 331 aaPredicted RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 SLC2A10O95528 541 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 IGHMP01871 453 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 IFNW1P05000 195 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 MMP7P09237 267 aaPredicted RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 IFI30P13284 250 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 CCL2P13500 99 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF250P15622 560 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 KDELR2P33947 212 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 OR1E2P47887 323 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TMEM33P57088 247 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 RAP1BP61224 184 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ERVS71-1P61550 626 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 RAP1AP62834 184 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TEKQ02763 1124 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 RUNX1T1Q06455 604 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ZMAT1Q5H9K5 638 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 PABPC1L2AQ5JQF8 200 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ARMC4Q5T2S8 1044 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 SHQ1Q6PI26 577 aaKnown RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 C1orf174Q8IYL3 243 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 MICU2Q8IYU8 434 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 LRRC18Q8N456 261 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 PAQR4Q8N4S7 273 aaPredicted RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TEX29Q8N6K0 151 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 MOSPD2Q8NHP6 518 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 CLDND2Q8NHS1 167 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 C10orf82Q8WW14 230 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 GEMIN6Q8WXD5 167 aaKnown RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 BPIFA2Q96DR5 249 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TPD52L3Q96J77 140 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF583Q96ND8 569 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 JAM3Q9BX67 310 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TXNIPQ9H3M7 391 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 NARFLQ9H6Q4 476 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 SIAEQ9HAT2 523 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 NKIRAS2Q9NYR9 191 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TAAR3PQ9P1P4 343 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 EIF3KQ9UBQ5 218 aaKnown RBP6.89□□□□□ -1.31
TRAF3-205ENST00000558700 TANC2Q9HCD6 1990 aa6.89□□□□□ -1.31
TRAF3-205ENST00000558700 CLDN25C9JDP6 229 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 RP2O75695 350 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 CLPTM1O96005 669 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 MSMBP08118 114 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF32P17041 273 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 CCNOP22674 350 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 STOMP27105 288 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 GCH1P30793 250 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 ADMP35318 185 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 GUCA1AP43080 201 aaPredicted RBP6.88□□□□□ -1.31
TRAF3-205ENST00000558700 MAGEB1P43366 347 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 SLC9A3P48764 834 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 GDI2P50395 445 aaKnown RBP6.88□□□□□ -1.31
TRAF3-205ENST00000558700 UCP2P55851 309 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 RPL27P61353 136 aaKnown RBP6.88□□□□□ -1.31
TRAF3-205ENST00000558700 PCBD1P61457 104 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 GLO1Q04760 184 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 FMODQ06828 376 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 TRAM2Q15035 370 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 ALKBH6Q3KRA9 238 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 ANKDD1AQ495B1 522 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 THEM4Q5T1C6 240 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 CGB2Q6NT52 195 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 CPEB3Q8NE35 698 aaKnown RBP6.88□□□□□ -1.31
TRAF3-205ENST00000558700 OR1J1Q8NGS3 322 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 OR51F2Q8NH61 342 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 NSMAFQ92636 917 aa6.88□□□□□ -1.31
TRAF3-205ENST00000558700 HDAC2Q92769 488 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms