RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	SMIM19	Q96E16	107 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	TMEM41A	Q96HV5	264 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	MAP6	Q96JE9	813 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SGCZ	Q96LD1	299 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SNX18	Q96RF0	628 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	MRPL13	Q9BYD1	178 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SMURF1	Q9HCE7	757 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ASCL3	Q9NQ33	180 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SLCO1C1	Q9NYB5	712 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	PLA2G3	Q9NZ20	509 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	LRFN1	Q9P244	771 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	KLHL13	Q9P2N7	655 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SPTBN2	O15020	2390 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602		A0A0G2JK05	382 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	TRBV2	A0A0J9YWF9	115 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	IQCM	A0A1B0GVH7	501 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602		A0A1W2PNV4	684 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CENPBD1	B2RD01	187 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	NPIPA5	E9PKD4	350 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SULT2B1	O00204	365 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CASK	O14936	926 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	PIN1P1	O15428	100 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ZFPL1	O95159	310 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SNX4	O95219	450 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	HLA-DQA2	P01906	255 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602		P04436	131 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	GAL	P22466	123 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	EDNRA	P25101	427 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CD40LG	P29965	261 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	NTF4	P34130	210 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	RFC3	P40938	356 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	EIF1	P41567	113 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CYB561	P49447	251 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	STAR	P49675	285 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	GBX2	P52951	348 aa	Predicted RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	PPP5C	P53041	499 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SUCLG1	P53597	346 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CLDN15	P56746	228 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	TAS2R43	P59537	309 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ACTA2	P62736	377 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ACTG2	P63267	376 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	MADCAM1	Q13477	382 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CAMK2D	Q13557	499 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ZNF79	Q15937	498 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ZNF239	Q16600	458 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	TMEM225	Q6GV28	225 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	RPL22L1	Q6P5R6	122 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	VHLL	Q6RSH7	139 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	LRRN1	Q6UXK5	716 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	LINC00696	Q6ZRV3	163 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	CEACAM19	Q7Z692	300 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	GPAT4	Q86UL3	456 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	VASH2	Q86V25	355 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	DND1	Q8IYX4	353 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SLC26A10	Q8NG04	563 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	OR10AC1	Q8NH08	325 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	KLHL15	Q96M94	604 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	OR14A2	Q96R54	314 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	INTS14	Q96SY0	518 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	COQ7	Q99807	217 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	SRXN1	Q9BYN0	137 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	ABCB9	Q9NP78	766 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	B3GAT2	Q9NPZ5	323 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	FRRS1L	Q9P0K9	344 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	LAMP5	Q9UJQ1	280 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	NPIPA1	Q9UND3	350 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	POLH	Q9Y253	713 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	TRAPPC4	Q9Y296	219 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	HDGFL3	Q9Y3E1	203 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	PEX16	Q9Y5Y5	336 aa		4.36	□□□□□ -1.71
IDH3A-208	ENST00000558602	FREM1	Q5H8C1	2179 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602		A0A087WZY1	265 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	DCDC2B	A2VCK2	349 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	ANKRD61	A6NGH8	418 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	NPIPB13	A6NJU9	1138 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	AQP7P3	A6NL99	342 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	NPIPB4	C9JG80	1138 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602		H3BSH0	61 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	TNFSF11	O14788	317 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	RGS5	O15539	181 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	TBX1	O43435	398 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	PMS2P2	O95744	297 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	WDPCP	O95876	746 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	PNP	P00491	289 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	RPLP1	P05386	114 aa	Known RBP	4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	SPARC	P09486	303 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	PGA4	P0DJD7	388 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	PGA3	P0DJD8	388 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	ITGA3	P26006	1051 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	THBS2	P35442	1172 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	ETV6	P41212	452 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	KIR3DL2	P43630	455 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	DAP3	P51398	398 aa	Known RBP	4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	NOVA1	P51513	510 aa	Known RBP	4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	TPTE	P56180	551 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	ADAM8	P78325	824 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	HSF2	Q03933	536 aa		4.35	□□□□□ -1.71
IDH3A-208	ENST00000558602	OXA1L	Q15070	435 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms