RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PIP5K1CO60331 668 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CTAG2O75638 210 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TNFSF13O75888 250 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 APOL3O95236 402 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CH25HO95992 272 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 IGF2P01344 180 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 YES1P07947 543 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 PNMTP11086 282 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CELP19835 753 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 ATP6V1E1P36543 226 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CD79BP40259 229 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CCR4P51679 360 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 POU4F2Q12837 409 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 GALEQ14376 348 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 CDK10Q15131 360 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TAB1Q15750 504 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TBRG1Q3YBR2 411 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 SMARCD3Q6STE5 483 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 PLET1Q6UQ28 207 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 SHFQ7M4L6 423 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 ATG4DQ86TL0 474 aaPredicted RBP9.15□□□□□ -0.95
TPM1-212ENST00000558347 TPRA1Q86W33 373 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TCTE3Q8IZS6 198 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 Q8N402 240 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 MEIOBQ8N635 442 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 LINC01560Q8TB33 94 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TMEM234Q8WY98 164 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 ST8SIA1Q92185 356 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 SMPDL3BQ92485 455 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 LRRC46Q96FV0 321 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 ZNF845Q96IR2 970 aaPredicted RBP9.15□□□□□ -0.95
TPM1-212ENST00000558347 TMEM43Q9BTV4 400 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TMED9Q9BVK6 235 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 RBM24Q9BX46 236 aaKnown RBP9.15□□□□□ -0.95
TPM1-212ENST00000558347 SLC19A3Q9BZV2 496 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 OR52D1Q9H346 318 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 SLA2Q9H6Q3 261 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TRIM36Q9NQ86 728 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 DDX28Q9NUL7 540 aaKnown RBP9.15□□□□□ -0.95
TPM1-212ENST00000558347 HAO2Q9NYQ3 351 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 COMMD3Q9UBI1 195 aa9.15□□□□□ -0.95
TPM1-212ENST00000558347 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
TPM1-212ENST00000558347 LINC01387J3KSC0 135 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 CDC42EP2O14613 210 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 HPGDSO60760 199 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 MT-ND5P03915 603 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 RAB25P57735 213 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 ACTC1P68032 377 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 ACTA1P68133 377 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 TESK1Q15569 626 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 PLPPR5Q32ZL2 321 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 SLC25A53Q5H9E4 307 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 HBMQ6B0K9 141 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 VWA1Q6PCB0 445 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 TMEM91Q6ZNR0 172 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 CHMP1BQ7LBR1 199 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 P4HA3Q7Z4N8 544 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 GGNQ86UU5 652 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 KLBQ86Z14 1044 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 BBS1Q8NFJ9 593 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 ZNF563Q8TA94 476 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 FNDC9Q8TBE3 224 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 POC1BQ8TC44 478 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 KCNJ15Q99712 375 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 ALG8Q9BVK2 526 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 LIME1Q9H400 295 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 MED31Q9Y3C7 131 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 HIVEP1P15822 2718 aa9.14□□□□□ -0.95
TPM1-212ENST00000558347 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 ANKRD61A6NGH8 418 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 TUBAL3A6NHL2 446 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 ELOA3DA6NLF2 546 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 A6NNC1 897 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 RIIAD1A6NNX1 92 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 C12orf71A8MTZ7 269 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 FAM25AB3EWG3 89 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 FAM25CB3EWG5 89 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 FAM25GB3EWG6 89 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PRR23D1E9PI22 279 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 PLPP2O43688 288 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 SLC43A1O75387 559 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 SLC2A10O95528 541 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 NUDT14O95848 222 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 OPN1LWP04000 364 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 FAM157BP0CG42 384 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PRR23D2P0DMB1 279 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 IFI30P13284 250 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 ZNF17P17021 662 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 APEX1P27695 318 aaKnown RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 KIR2DL2P43627 348 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 NKX2-5P52952 324 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 BTG1P62324 171 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 MRPS15P82914 257 aaKnown RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 SORDQ00796 357 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 IL18Q14116 193 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PON3Q15166 354 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 TOMM34Q15785 309 aaPredicted RBP9.13□□□□□ -0.95
TPM1-212ENST00000558347 ELOA3BQ3SY89 546 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PLBD1Q6P4A8 553 aa9.13□□□□□ -0.95
TPM1-212ENST00000558347 PAMR1Q6UXH9 720 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms