RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TRAV24A0A0B4J272 114 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 GLYATL1P3A0A0U1RQE8 302 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 MEX3AA1L020 520 aaKnown RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 CLPSL1A2RUU4 121 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 A8MUA0 341 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 E9PBE3 544 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 H0Y8G0 127 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 L7N2F9 121 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 SGK494L7N484 410 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PSMD3O43242 534 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 ATP6V1G1O75348 118 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 TRIM3O75382 744 aaPredicted RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 VPS26AO75436 327 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 TPM3P06753 285 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 CPA3P15088 417 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 GIFP27352 417 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 HMGCLP35914 325 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 NSFP46459 744 aaKnown RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 FUT7Q11130 342 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 BAMBIQ13145 260 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 GUSBP1Q15486 140 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 SLC9A3R2Q15599 337 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PDK4Q16654 411 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PRAMEF20Q5VT98 475 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 SLC22A10Q63ZE4 541 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 FAHD2BQ6P2I3 314 aaPredicted RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 SCIMPQ6UWF3 145 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 ENPP6Q6UWR7 440 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 SYT10Q6XYQ8 523 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 LRRC70Q7Z2Q7 622 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 SLC22A9Q8IVM8 553 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 CENPLQ8N0S6 344 aaPredicted RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 GBP7Q8N8V2 638 aaPredicted RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 NOA1Q8NC60 698 aaKnown RBP4.61□□□□□ -1.67
RTF1-204ENST00000558117 SLC37A3Q8NCC5 494 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 OR2L3Q8NG85 312 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 OR2L8Q8NGY9 312 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PAQR8Q8TEZ7 354 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 GGHQ92820 318 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 NCLNQ969V3 563 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 FAHD2AQ96GK7 314 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 DHRS9Q9BPW9 319 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 ACTR8Q9H981 624 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 ETNK2Q9NVF9 386 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PAK5Q9P286 719 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 CIDEBQ9UHD4 219 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 DNAH11Q96DT5 4516 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 KMT2AQ03164 3969 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
RTF1-204ENST00000558117 ARPC4-TTLL3A0A0A6YYG9 625 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 NPIPA5A0A0B4J1W7 369 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 A0A0U1RQV5 110 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 WI2-2373I1.2A0A1W2PRP0 233 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 MFSD2BA6NFX1 497 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 NPIPA7E9PJI5 369 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 K7EQM0 130 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 RDH16O75452 317 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 CLPXO76031 633 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 STAMBPO95630 424 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 GNA14O95837 355 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ACTL6AO96019 429 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 GYPCP04921 128 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ATP1B1P05026 303 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 FHP07954 510 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 MSMBP08118 114 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ZCCHC18P0CG32 403 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 PNMA6AP0CW24 399 aaPredicted RBP4.6□□□□□ -1.67
RTF1-204ENST00000558117 NPIPA8P0DM63 369 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 IL1RNP18510 177 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 GALP22466 123 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 CALB2P22676 271 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 XGP55808 180 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 RAG2P55895 527 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 SSTP61278 116 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 BTG2P78543 158 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 SRYQ05066 204 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ILF2Q12905 390 aaKnown RBP4.6□□□□□ -1.67
RTF1-204ENST00000558117 TRIP10Q15642 601 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 NDUFA9Q16795 377 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ZNF791Q3KP31 576 aaPredicted RBP4.6□□□□□ -1.67
RTF1-204ENST00000558117 ANKRD55Q3KP44 614 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 SAXO2Q658L1 398 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 OR2A2Q6IF42 318 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 LRRTM1Q86UE6 522 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 MISPQ8IVT2 679 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 LRRC8AQ8IWT6 810 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 LYG1Q8N1E2 194 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ATPAF2Q8N5M1 289 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 OR2A1Q8NGT9 310 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 OR4F5Q8NH21 305 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 OR6S1Q8NH40 331 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ZNF519Q8TB69 540 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 ZNRF4Q8WWF5 429 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 PIK3R3Q92569 461 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 S100PBPQ96BU1 408 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 TPD52L3Q96J77 140 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 JSRP1Q96MG2 331 aaPredicted RBP4.6□□□□□ -1.67
RTF1-204ENST00000558117 ZNF607Q96SK3 696 aa4.6□□□□□ -1.67
RTF1-204ENST00000558117 DPH7Q9BTV6 452 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms