RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 ZNF629Q9UEG4 869 aaPredicted RBP14.83□□□□□ -0.04
SNX1-203ENST00000558040 CYB5R1Q9UHQ9 305 aa14.83□□□□□ -0.04
SNX1-203ENST00000558040 COPS3Q9UNS2 423 aa14.83□□□□□ -0.04
SNX1-203ENST00000558040 A0A0G2JNJ9 132 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 MT-ND5P03915 603 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 SCG5P05408 212 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 CST2P09228 141 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 RPS27P42677 84 aaKnown RBP14.82□□□□□ -0.04
SNX1-203ENST00000558040 RPL5P46777 297 aaKnown RBP14.82□□□□□ -0.04
SNX1-203ENST00000558040 PCBD1P61457 104 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 ENDOGQ14249 297 aaKnown RBP14.82□□□□□ -0.04
SNX1-203ENST00000558040 SPHARQ15513 63 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 MED22Q15528 200 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 C9orf135Q5VTT2 229 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 UBE2UQ5VVX9 321 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 OTPQ5XKR4 325 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 XAF1Q6GPH4 301 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 PLEKHG7Q6ZR37 379 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 FAM220AQ7Z4H9 259 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 DCXRQ7Z4W1 244 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 KCTD20Q7Z5Y7 419 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 LINC00346Q8IVM7 164 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 SYS1Q8N2H4 156 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 LRRC18Q8N456 261 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 ZNF649Q9BS31 505 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 ABHD6Q9BV23 337 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 ZNF416Q9BWM5 594 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 C1orf198Q9H425 327 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 ASH2LQ9UBL3 628 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 Q9UFV3 132 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 SHANK1Q9Y566 2161 aa14.82□□□□□ -0.04
SNX1-203ENST00000558040 DSPP15924 2871 aaKnown RBP14.82□□□□□ -0.04
SNX1-203ENST00000558040 PHF3Q92576 2039 aaKnown RBP14.82□□□□□ -0.04
SNX1-203ENST00000558040 ZGRF1Q86YA3 2104 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 SPTA1P02549 2419 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 DVL2O14641 736 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 MSTNO14793 375 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 SEC14L2O76054 403 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 TFAP2AP05549 437 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 KRT8P05787 483 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 LCKP06239 509 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 ITGA5P08648 1049 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 TACSTD2P09758 323 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 P2RY6Q15077 328 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 CDONQ4KMG0 1287 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 OR2G6Q5TZ20 316 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 ANKRD16Q6P6B7 361 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 KLHL24Q6TFL4 600 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 SSX6Q7RTT6 188 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 SLC16A14Q7RTX9 510 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 DPPA2Q7Z7J5 298 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 SYT9Q86SS6 491 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 RFLNBQ8N5W9 214 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 ZNF610Q8N9Z0 462 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 GALNT11Q8NCW6 608 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 GJC3Q8NFK1 279 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 OR52N5Q8NH56 324 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 HAVCR2Q8TDQ0 301 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 HTRA1Q92743 480 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 MUL1Q969V5 352 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 OPN3Q9H1Y3 402 aaPredicted RBP14.81□□□□□ -0.04
SNX1-203ENST00000558040 GDF2Q9UK05 429 aaPredicted RBP14.81□□□□□ -0.04
SNX1-203ENST00000558040 IKZF2Q9UKS7 526 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 KLHDC2Q9Y2U9 406 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 LSM2Q9Y333 95 aaKnown RBP14.81□□□□□ -0.04
SNX1-203ENST00000558040 LHFPL6Q9Y693 200 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 ZZEF1O43149 2961 aa14.81□□□□□ -0.04
SNX1-203ENST00000558040 USP24Q9UPU5 2620 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 CACNA1BQ00975 2339 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 J3QLW9 94 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 CCL21O00585 134 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 SULT1C4O75897 302 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 PSKH1P11801 424 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 ZNF19P17023 458 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 COX5AP20674 150 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 BMP5P22003 454 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 IGHV1-2P23083 117 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 PSMB9P28065 219 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 SCRN3Q0VDG4 424 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 MRPL28Q13084 256 aaKnown RBP14.8□□□□□ -0.04
SNX1-203ENST00000558040 MRPL49Q13405 166 aaKnown RBP14.8□□□□□ -0.04
SNX1-203ENST00000558040 SLC36A2Q495M3 483 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 CORO6Q6QEF8 472 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 KRT77Q7Z794 578 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 MRGPRGQ86SM5 289 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 GABRG1Q8N1C3 465 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 C1orf162Q8NEQ5 155 aaPredicted RBP14.8□□□□□ -0.04
SNX1-203ENST00000558040 OR1K1Q8NGR3 316 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 ST7LQ8TDW4 575 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 SPRYD4Q8WW59 207 aaPredicted RBP14.8□□□□□ -0.04
SNX1-203ENST00000558040 NANOS1Q8WY41 292 aaKnown RBP14.8□□□□□ -0.04
SNX1-203ENST00000558040 C4orf36Q96KX1 117 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 OR8B4Q96RC9 309 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 SH3GL3Q99963 347 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 MROQ9BYG7 248 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 TTTY10Q9BZA0 68 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 GALNT8Q9NY28 637 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 GNG8Q9UK08 70 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 BSNQ9UPA5 3926 aa14.8□□□□□ -0.04
SNX1-203ENST00000558040 A0A1B0GUH1 482 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms