RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 SLC25A40Q8TBP6 338 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 KLF14Q8TD94 323 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 ACOT11Q8WXI4 607 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 RAB1CQ92928 201 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 MARS2Q96GW9 593 aaKnown RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 HSH2DQ96JZ2 352 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 OR2J1Q9GZK6 312 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 EGLN1Q9GZT9 426 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 ELOVL3Q9HB03 270 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 CYSLTR2Q9NS75 346 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
SHMT2-235ENST00000557740 WIPI2Q9Y4P8 454 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 SNX13Q9Y5W8 968 aa12.46□□□□□ -0.41
SHMT2-235ENST00000557740 C12orf71A8MTZ7 269 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 H3BSA7 217 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 H7C1C5 153 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 XKRYO14609 159 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 MPZL1O95297 269 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 PNPP00491 289 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 IGHV1-46P01743 117 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 COX4I1P13073 169 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 GPR4P46093 362 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 ARHGDIAP52565 204 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 SLC7A2P52569 658 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 LCN6P62502 163 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 ZNF774Q6NX45 483 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 THSD4Q6ZMP0 1018 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 FOXL2NBQ6ZUU3 175 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 RRM2BQ7LG56 351 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 CYP4Z1Q86W10 505 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 RNF113BQ8IZP6 322 aaKnown RBP12.45□□□□□ -0.42
SHMT2-235ENST00000557740 LRRC75AQ8NAA5 344 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 GMPR2Q9P2T1 348 aaKnown RBP12.45□□□□□ -0.42
SHMT2-235ENST00000557740 GRHPRQ9UBQ7 328 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 NDRG4Q9ULP0 352 aaKnown RBP12.45□□□□□ -0.42
SHMT2-235ENST00000557740 CACNG2Q9Y698 323 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
SHMT2-235ENST00000557740 A0A0A6YYJ9 748 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 A0A0G2JMP0 313 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 A0A0X1KG70 313 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ISPDA4D126 451 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ZSCAN5BA6NJL1 495 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 FFAR1O14842 300 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 SERPINA1P01009 418 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 GSTM3P21266 225 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 FUT4P22083 530 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 LIPAP38571 399 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 MMP15P51511 669 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 SLC3A1Q07837 685 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
SHMT2-235ENST00000557740 HSP90B2PQ58FF3 399 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 MBOAT2Q6ZWT7 520 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 CBLL1Q75N03 491 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ZER1Q7Z7L7 766 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 OR4M2Q8NGB6 313 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 CCL17Q92583 94 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 FAM162AQ96A26 154 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 C4orf45Q96LM5 186 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ZNF570Q96NI8 536 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 GAL3ST1Q99999 423 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 HOPXQ9BPY8 73 aaPredicted RBP12.44□□□□□ -0.42
SHMT2-235ENST00000557740 POLE4Q9NR33 117 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 TMEM5Q9Y2B1 443 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 ADAM18Q9Y3Q7 739 aa12.44□□□□□ -0.42
SHMT2-235ENST00000557740 A0A087WUU8 490 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 NME4O00746 187 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 NDUFAB1O14561 156 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 PLPP2O43688 288 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 TIMM8AO60220 97 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 DOK2O60496 412 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ICMTO60725 284 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 CCDC22O60826 627 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 DEAF1O75398 565 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ABHD16AO95870 558 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 NGFP01138 241 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ADH4P08319 380 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 CD14P08571 375 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 GSK3BP49841 420 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 SCRN3Q0VDG4 424 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 FHL1Q13642 323 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ZBED5Q49AG3 693 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 TBPL2Q6SJ96 375 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ZNF771Q7L3S4 317 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 SYT9Q86SS6 491 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 PEG10Q86TG7 708 aaKnown RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 FAM156AQ8NDB6 213 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ZNF418Q8TF45 676 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 KCTD14Q9BQ13 255 aaPredicted RBP12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ANKRD19PQ9H560 264 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 CCDC134Q9H6E4 229 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 EMC7Q9NPA0 242 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 G6PC2Q9NQR9 355 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ZDHHC8Q9ULC8 765 aa12.43□□□□□ -0.42
SHMT2-235ENST00000557740 ANK2Q01484 3957 aa12.42□□□□□ -0.42
SHMT2-235ENST00000557740 LOC105371242A0A075B767 164 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms