RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 DHRS9Q9BPW9 319 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF416Q9BWM5 594 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CDADC1Q9BWV3 514 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF442Q9H7R0 627 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CISD1Q9NZ45 108 aaKnown RBP11.89□□□□□ -0.51
SHMT2-234ENST00000557703 POU2F3Q9UKI9 436 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 FBN2P35556 2912 aa11.89□□□□□ -0.51
SHMT2-234ENST00000557703 IGHV2OR16-5A0A0B4J2B6 119 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 SAC3D1A6NKF1 404 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 DCTN6O00399 190 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 GLCEO94923 617 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 BAG2O95816 211 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 RAF1P04049 648 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 IGFBP1P08833 259 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 GAAP10253 952 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF35P13682 527 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF823P16415 610 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF32P17041 273 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 SPI1P17947 270 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 APOBEC3AP31941 199 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 RAD52P43351 418 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 IDH3GP51553 393 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 CDC42P60953 191 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 EFNB1P98172 346 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 GALK2Q01415 458 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 TEKQ02763 1124 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 PIGFQ07326 219 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 ENDOGQ14249 297 aaKnown RBP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 PCK2Q16822 640 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 CBR4Q8N4T8 237 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 SLC30A7Q8NEW0 376 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 OR2AJ1Q8NGZ0 328 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 AKAP1Q92667 903 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 PTP4A1Q93096 173 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 FBXO17Q96EF6 278 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 HRASLS5Q96KN8 279 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 COG8Q96MW5 612 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 DCLRE1CQ96SD1 692 aaKnown RBP11.88□□□□□ -0.51
SHMT2-234ENST00000557703 C1QTNF6Q9BXI9 259 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 BCL2L14Q9BZR8 327 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 OR2H1Q9GZK4 316 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 HDHD2Q9H0R4 259 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 RERGLQ9H628 205 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 POLR1DQ9Y2S0 133 aa11.88□□□□□ -0.51
SHMT2-234ENST00000557703 DSCAMO60469 2012 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 HRNRQ86YZ3 2850 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ARID1AO14497 2285 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 EI24O14681 340 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 SGCEO43556 437 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 HLA-DQA2P01906 255 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ANPEPP15144 967 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 NR4A1P22736 598 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 DNASE1P24855 282 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 STOMP27105 288 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 EVX1P49640 407 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 CDH11P55287 796 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 HIST1H3AP68431 136 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ELF3P78545 371 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 PSG4Q00888 419 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 TMED1Q13445 227 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 RAB39AQ14964 217 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 HIST2H3PS2Q5TEC6 136 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 AGAP6Q5VW22 663 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 C12orf73Q69YU5 71 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 HIST2H3AQ71DI3 136 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 SHFQ7M4L6 423 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 DTX2Q86UW9 622 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ZNF584Q8IVC4 421 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 SMAP2Q8WU79 429 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 C11orf40Q8WZ69 217 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 TSSK2Q96PF2 358 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 VCXQ9H320 206 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 MARCH7Q9H992 704 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ELOVL3Q9HB03 270 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 BEX4Q9NWD9 120 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 TVP23BQ9NYZ1 205 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 EIF3KQ9UBQ5 218 aaKnown RBP11.87□□□□□ -0.51
SHMT2-234ENST00000557703 ST6GALNAC2Q9UJ37 374 aa11.87□□□□□ -0.51
SHMT2-234ENST00000557703 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 OR6C6A6NF89 314 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 ERICH4A6NGS2 130 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 SLC22A31A6NKX4 558 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 SNTNA6NMZ2 147 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 H3BSA7 217 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 CASQ2O14958 399 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-234ENST00000557703 MPZL2O60487 215 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 TFP02787 698 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 PAX1P15863 534 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 GLRXP35754 106 aa11.86□□□□□ -0.51
SHMT2-234ENST00000557703 RGS6P49758 472 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms