RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 HRASLS2Q9NWW9 162 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 IL37Q9NZH6 218 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 APOBEC3BQ9UH17 382 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 DCDC2Q9UHG0 476 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ING4Q9UNL4 249 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF256Q9Y2P7 627 aaPredicted RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 RBMX2Q9Y388 322 aaKnown RBP2.37□□□□□ -2.03
TRAV28-201ENST00000557548 NOTCH4Q99466 2003 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 UBN2Q6ZU65 1347 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 TTC21AQ8NDW8 1320 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 SIGLEC1Q9BZZ2 1709 aa2.37□□□□□ -2.03
TRAV28-201ENST00000557548 ADCY10Q96PN6 1610 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 A0A087WWV3 80 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 A0A0A6YYH2 397 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 A0A0G2JLM5 398 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 GLYATL1P3A0A0U1RQE8 302 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 A0A1B0GW55 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 MGAT4DA6NG13 374 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 OR6C70A6NIJ9 312 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 A6NJ64 397 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 USP27XA6NNY8 438 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 KRTAP16-1A8MUX0 517 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF99A8MXY4 864 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CENPBD1B2RD01 187 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ERVV-1B6SEH8 477 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 C12orf77C9JDV5 145 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 E7ENQ6 273 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 F6UB75 175 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZBTB5O15062 677 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 AGPAT2O15120 278 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 SCN2BO60939 215 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF780AO75290 641 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF189O75820 626 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 RPP14O95059 124 aaKnown RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CD160O95971 181 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 IGHV3-48P01763 117 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 HLA-HP01893 362 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 SEMG1P04279 462 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF883P0CG24 379 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L2P0CJ85 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L3P0CJ86 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L4P0CJ87 422 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L5P0CJ88 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L6P0CJ89 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L7P0CJ90 424 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PNMA6AP0CW24 399 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 RNF224P0DH78 156 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 AQP2P41181 271 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 GLP1RP43220 463 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 GPR6P46095 362 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 HSPA13P48723 471 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 RORCP51449 518 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PSMD4P55036 377 aaKnown RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CLDN18P56856 261 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF763Q0D2J5 394 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 EGFEM1PQ0D2K5 195 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ECH1Q13011 328 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ART3Q13508 389 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CYTH1Q15438 398 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ATP6AP1Q15904 470 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 GABRA6Q16445 453 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PSG3Q16557 428 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 Q1RN00 199 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 C18orf21Q32NC0 220 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PTPN20Q4JDL3 420 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CDKL4Q5MAI5 379 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 VAX1Q5SQQ9 334 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF658Q5TYW1 1059 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 GPR107Q5VW38 600 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 STUMQ69YW2 141 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CNIH2Q6PI25 160 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 DUX4L9Q6RFH8 374 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF620Q6ZNG0 422 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PLEKHG7Q6ZR37 379 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 MRPL21Q7Z2W9 205 aaKnown RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 FAM122BQ7Z309 247 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 HDDC2Q7Z4H3 204 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 HSD17B13Q7Z5P4 300 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CMC1Q7Z7K0 106 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 KRTAP7-1Q8IUC3 87 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ITPRIPQ8IWB1 547 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 FAM86B1Q8N7N1 296 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 SNX31Q8N9S9 440 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 INO80EQ8NBZ0 244 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 FBXO36Q8NEA4 188 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 OR56A4Q8NGH8 313 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 OR51S1Q8NGJ8 323 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 RHOXF1Q8NHV9 184 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ENKURQ8TC29 256 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PIH1D2Q8WWB5 315 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 ACOT11Q8WXI4 607 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CACNG8Q8WXS5 425 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 NAT6Q93015 286 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 MYDGFQ969H8 173 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 PPP1R14BQ96C90 147 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 OPTNQ96CV9 577 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 OPALINQ96PE5 141 aa2.36□□□□□ -2.03
TRAV28-201ENST00000557548 NAPGQ99747 312 aaPredicted RBP2.36□□□□□ -2.03
TRAV28-201ENST00000557548 CTRCQ99895 268 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms