RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SCRN3Q0VDG4 424 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 EFNB3Q15768 340 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 MICAQ29983 383 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 CLEC12AQ5QGZ9 265 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 PGM2L1Q6PCE3 622 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ARL9Q6T311 187 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 GLB1L2Q8IW92 636 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ADGRG5Q8IZF4 528 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 CIARTQ8N365 385 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 OR10G2Q8NGC3 310 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 FGFBP3Q8TAT2 258 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 NABP1Q96AH0 204 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 SLC7A6OSQ96CW6 309 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 GPA33Q99795 319 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 RHNO1Q9BSD3 238 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 RAB1BQ9H0U4 201 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 POLE4Q9NR33 117 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 VSX1Q9NZR4 365 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 GPR160Q9UJ42 338 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 GDF2Q9UK05 429 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 POMPQ9Y244 141 aa12.18□□□□□ -0.46
SLIRP-207ENST00000556831 ANK3Q12955 4377 aaKnown RBP12.18□□□□□ -0.46
SLIRP-207ENST00000556831 A0A1W2PPW3 197 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 TRIM64A6NGJ6 449 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 TRIM64BA6NI03 449 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 ARPC3O15145 178 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 CIB2O75838 187 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 SNAP29O95721 258 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 MMP7P09237 267 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 INHBBP09529 407 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 CSF3P09919 207 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 FAM157BP0CG42 384 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF35P13682 527 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 CTLA4P16410 223 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 APEX1P27695 318 aaKnown RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 GLRXP35754 106 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 PPOXP50336 477 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 EFNA4P52798 201 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 PPP1R8Q12972 351 aaKnown RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 RGS7BPQ6MZT1 257 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 RASSF6Q6ZTQ3 369 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 SYT9Q86SS6 491 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 BIVMQ86UB2 503 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF584Q8IVC4 421 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 SVOPLQ8N434 492 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 OR10H5Q8NGA6 315 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 OR4C15Q8NGM1 316 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 OR4K13Q8NH42 304 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 CANT1Q8WVQ1 401 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 MYCBPQ99417 103 aaPredicted RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF416Q9BWM5 594 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 BCL2L14Q9BZR8 327 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 OR51B6Q9H340 312 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 EGLN3Q9H6Z9 239 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 NDRG4Q9ULP0 352 aaKnown RBP12.17□□□□□ -0.46
SLIRP-207ENST00000556831 RTTNQ86VV8 2226 aa12.17□□□□□ -0.46
SLIRP-207ENST00000556831 C5orf49A4QMS7 147 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 H3BN98 237 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 M0R233 179 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 GSC2O15499 205 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 GPRIN2O60269 458 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 DOK2O60496 412 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 GASTP01350 101 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 HLA-DQA2P01906 255 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 MT-ND5P03915 603 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 CCL2P13500 99 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 FXYD6P3P58550 94 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 GLO1Q04760 184 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 AQP6Q13520 282 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 CARTPTQ16568 116 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 SWI5Q1ZZU3 235 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 C1orf146Q5VVC0 180 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 FOXL2NBQ6ZUU3 175 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 SDR9C7Q8NEX9 313 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 OR2T33Q8NG76 320 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 AKR7LQ8NHP1 331 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 TEX47Q8TBZ9 253 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 GIPC3Q8TF64 312 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 SNX33Q8WV41 574 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 C11orf40Q8WZ69 217 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 MRPL24Q96A35 216 aaKnown RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 FOXN4Q96NZ1 517 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 SNX18Q96RF0 628 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 NMNAT3Q96T66 252 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 CADM1Q9BY67 442 aaKnown RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 OR2H1Q9GZK4 316 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 NUAK2Q9H093 628 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 DCLRE1BQ9H816 532 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 RNPEPL1Q9HAU8 725 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 MYOZ1Q9NP98 299 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 RPRD1BQ9NQG5 326 aaKnown RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 DUSP13Q9UII6 198 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
SLIRP-207ENST00000556831 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-207ENST00000556831 SGCEO43556 437 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms