RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PLEKHA6Q9Y2H5 1048 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 POLR1DQ9Y2S0 133 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 ATP23Q9Y6H3 246 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 CSMD1Q96PZ7 3565 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 IGHV2OR16-5A0A0B4J2B6 119 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 TVP23AA6NH52 213 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 C12orf71A8MTZ7 269 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 E7EQL1 145 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 M0R129 80 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 TFP02787 698 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 HMGN1P05114 100 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 SERPINA5P05154 406 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 ALPLP05186 524 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 CCL2P13500 99 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 SPI1P17947 270 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 SLC25A1P53007 311 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 PSG4Q00888 419 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 GLO1Q04760 184 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 PLBD1Q6P4A8 553 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 CDH24Q86UP0 819 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 DEPDC4Q8N2C3 294 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 CPEB3Q8NE35 698 aaKnown RBP15.16■□□□□ 0.02
SHMT2-225ENST00000556798 FBXW5Q969U6 566 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 PLEKHA8Q96JA3 519 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 C9orf16Q9BUW7 83 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 GABARAPL3Q9BY60 117 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 OR2H1Q9GZK4 316 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 HINT3Q9NQE9 182 aaKnown RBP15.16■□□□□ 0.02
SHMT2-225ENST00000556798 MRPL22Q9NWU5 206 aaKnown RBP15.16■□□□□ 0.02
SHMT2-225ENST00000556798 USE1Q9NZ43 259 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 CISD1Q9NZ45 108 aaKnown RBP15.16■□□□□ 0.02
SHMT2-225ENST00000556798 ASH2LQ9UBL3 628 aa15.16■□□□□ 0.02
SHMT2-225ENST00000556798 ZAR1LA6NP61 321 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ANPEPP15144 967 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 APEX1P27695 318 aaKnown RBP15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ALDH3A2P51648 485 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 PCBD1P61457 104 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ELF3P78545 371 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-225ENST00000556798 TEKQ02763 1124 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 PLP2Q04941 152 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 SNAPC1Q16533 368 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 KCNMB1Q16558 191 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF774Q6NX45 483 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 PAQR4Q8N4S7 273 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-225ENST00000556798 SLC30A7Q8NEW0 376 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 OR10H5Q8NGA6 315 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 OR6K6Q8NGW6 343 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 EME1Q96AY2 570 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 SLC29A1Q99808 456 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 TEX12Q9BXU0 123 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 WNT5BQ9H1J7 359 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ENOPH1Q9UHY7 261 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 ST6GALNAC2Q9UJ37 374 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 FBXL3Q9UKT7 428 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 TIMM10BQ9Y5J6 103 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 NAV2Q8IVL1 2488 aa15.15■□□□□ 0.02
SHMT2-225ENST00000556798 IQCMA0A1B0GVH7 501 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 PRR23D1E9PI22 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 PRR23D2P0DMB1 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 PAICSP22234 425 aaKnown RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 RPS27P42677 84 aaKnown RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 LSM6P62312 80 aaKnown RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 HGFACQ04756 655 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 SCRN3Q0VDG4 424 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 AQP6Q13520 282 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 ZIK1Q3SY52 487 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-225ENST00000556798 SLX4IPQ5VYV7 408 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 KRT80Q6KB66 452 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 CORO6Q6QEF8 472 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 VHLLQ6RSH7 139 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 ZBTB49Q6ZSB9 765 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 CPOQ8IVL8 374 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 LINC00346Q8IVM7 164 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF511Q8NB15 262 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 BBS1Q8NFJ9 593 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 OR51V1Q9H2C8 321 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 ORC6Q9Y5N6 252 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 LHFPL6Q9Y693 200 aa15.14■□□□□ 0.01
SHMT2-225ENST00000556798 PRKYO43930 277 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 DOK2O60496 412 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 ATE1O95260 518 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 RAF1P04049 648 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 PSKH1P11801 424 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF35P13682 527 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 STOMP27105 288 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 APLNRP35414 380 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 KEAP1Q14145 624 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 TRIP10Q15642 601 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 TBC1D28Q2M2D7 210 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 LINC01590Q5TEZ4 76 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 C12orf73Q69YU5 71 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 C20orf204Q6ZNR8 217 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 CXXC5Q7LFL8 322 aaKnown RBP15.13■□□□□ 0.01
SHMT2-225ENST00000556798 SYT9Q86SS6 491 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 ZNF611Q8N823 705 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 IL17RDQ8NFM7 739 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 PTP4A1Q93096 173 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 TEX15Q9BXT5 2789 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 OR51B6Q9H340 312 aa15.13■□□□□ 0.01
SHMT2-225ENST00000556798 WDR76Q9H967 626 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms