RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SYT3Q9BQG1 590 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 ADAM18Q9Y3Q7 739 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 CMAHPQ9Y471 501 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 ORC6Q9Y5N6 252 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 ABCA1O95477 2261 aa8.88□□□□□ -0.99
SHMT2-224ENST00000556737 NDUFS8O00217 210 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 SOCS2O14508 198 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 EI24O14681 340 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 OR10H3O60404 316 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 IGHV4-31P0DP07 118 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 CCL2P13500 99 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF32P17041 273 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 NR4A2P43354 598 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 EVX1P49640 407 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 RPS23P62266 143 aaKnown RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 ERVK-25P63136 954 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 MAD2L1BPQ15013 274 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 SLC36A2Q495M3 483 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 ZBED5Q49AG3 693 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 PABPC1L2AQ5JQF8 200 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 C6orf52Q5T4I8 152 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 TMEM53Q6P2H8 277 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 SHQ1Q6PI26 577 aaKnown RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 LRP11Q86VZ4 500 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 HS3ST5Q8IZT8 346 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 LRRC18Q8N456 261 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 ARIH2OSQ8N7S6 290 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 CPEB3Q8NE35 698 aaKnown RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 OR10G2Q8NGC3 310 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 GIPC3Q8TF64 312 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 NSMAFQ92636 917 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 Q96M85 177 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 GPX7Q96SL4 187 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 GPA33Q99795 319 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 PIMREGQ9BSJ6 248 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 TPK1Q9H3S4 243 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 C1orf198Q9H425 327 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF556Q9HAH1 456 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 SIAEQ9HAT2 523 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 NTN4Q9HB63 628 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 DYNLRB1Q9NP97 96 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 MYOZ1Q9NP98 299 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 FBXO9Q9UK97 447 aaPredicted RBP8.87□□□□□ -0.99
SHMT2-224ENST00000556737 FZR1Q9UM11 496 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 SIGLEC7Q9Y286 467 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 TMEM5Q9Y2B1 443 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 LYVE1Q9Y5Y7 322 aa8.87□□□□□ -0.99
SHMT2-224ENST00000556737 RTTNQ86VV8 2226 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 IGLV3-9A0A075B6K5 115 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 LOC100509620A0A075B734 347 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 IGHV4-61A0A0C4DH41 118 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 TEX13CA0A0J9YWL9 993 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 LOC390937A0A1W2PQ73 354 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 SLC22A23A1A5C7 686 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 A6NIZ1 184 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 M0R233 179 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 SYNGR3O43761 229 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 TLX2O43763 284 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 PTP4A3O75365 173 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 CRLF1O75462 422 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 SCG5P05408 212 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 CD14P08571 375 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 ADRA2AP08913 450 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 FAM157BP0CG42 384 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 NR2C1P13056 603 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 ZNF16P17020 682 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 USF1P22415 310 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 PRKACGP22612 351 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 GIFP27352 417 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 APEX1P27695 318 aaKnown RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 WNT5AP41221 380 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 ALDH3B1P43353 468 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 AQP4P55087 323 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RAP1BP61224 184 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 ERVS71-1P61550 626 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RAP1AP62834 184 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 PPP2R2BQ00005 443 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 GALK2Q01415 458 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 ENDOGQ14249 297 aaKnown RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 TMEM255AQ5JRV8 349 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 THEM4Q5T1C6 240 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 FAM27BQ5VT28 67 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 TMEM179BQ7Z7N9 219 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 FNDC8Q8TC99 324 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 NEU4Q8WWR8 484 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RBM4BQ9BQ04 359 aaKnown RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RBM4Q9BWF3 364 aaKnown RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 BPESC1Q9GZL8 116 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RAB1BQ9H0U4 201 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 WNT5BQ9H1J7 359 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 RNF121Q9H920 327 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 KRCC1Q9NPI7 259 aaPredicted RBP8.86□□□□□ -0.99
SHMT2-224ENST00000556737 NRIP3Q9NQ35 241 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 C8orf4Q9NR00 106 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 SPEF1Q9Y4P9 236 aa8.86□□□□□ -0.99
SHMT2-224ENST00000556737 A0A1W2PPL8 197 aa8.85□□□□□ -0.99
SHMT2-224ENST00000556737 SH3PXD2BA1X283 911 aa8.85□□□□□ -0.99
SHMT2-224ENST00000556737 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
SHMT2-224ENST00000556737 IMPA2O14732 288 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms